Hi there
I have a file with a variable amount of rows but the 45th, 46th and 47th charachter of each line is the status field which is a three digit code ie 001, 002, 003 etc. My question is this..I need to strip all the records/lines with 002's out of the file completely and put them into... (14 Replies)
Can anyone tell me what could be the solution to following :
I have one .txt file which contains some "seed" information. This seed may appear multiple time in the file so what I want do is if this seed appears again in the file then that line should be removed.
Please provide the script code... (4 Replies)
Hello,
I've to change the shell in /etc/passwd for some users .
I've the list of users but I'm not able to modify the file with scripting .
I'm working on a Sol10 .
Can anyone help me ?
tnks (7 Replies)
I have searched the forum for this - forgive me if I missed a previous post.
I have the following file:
blah blah blah
blah blah blah
blah blah blah
blah blah blah
blah blah blah
alter table "informix".esc_acct add constraint (foreign key (fi_id)
references "informix".fi ... (5 Replies)
Hi,
I have requirement that I need to split my input file into two files based on a search pattern "abc"
For eg. my input file has below content
abc
defgh
zyx
I need file 1 with
abc
and file2 with
defgh
zyx
I can use grep command to acheive this. But with grep I need... (8 Replies)
I am trying to remove lines in the target.txt file if $5 before the - in that file matches sorted_list. I have tried grep and awk. Thank you :).
grep
grep -v -F -f targets.bed sort_list
grep -vFf sort_list targets
awk
awk -F, '
> FILENAME == ARGV {to_remove=1; next}
> ! ($5 in... (2 Replies)
In the awk piped to sed below I am trying to format file by removing the odd xxxx_digits and whitespace after, then move the even xxxx_digit to the line above it and add a space between them. There may be multiple lines in file but they are in the same format. The Filename_ID line is the last line... (4 Replies)
Discussion started by: cmccabe
4 Replies
LEARN ABOUT DEBIAN
asnmacro
ASNMACRO(1) NCBI Tools User's Manual ASNMACRO(1)NAME
asnmacro - process ASN.1 biological data per Sequin macros
SYNOPSIS
asnmacro [-] [-b] [-d] [-e] [-i filename] -m filename [-o filename] [-p path] [-r path] [-s str] [-x str]
DESCRIPTION
asnmacro is a command-line tool to run Sequin macros on annotated biological sequence data represented according to NCBI's ASN.1 specifica-
tions.
OPTIONS
A summary of options is included below.
- Print usage message
-b Input is Binary
-d Output is binary
-e Input is a Seq-Entry
-i filename
Single input file
-m filename
Macro file
-o filename
Single Output file
-p path
Path to multiple input files
-r path
Path for Results when processing multiple files
-s str Suffix for stripped (output) files
-x str Suffix for input files with -p (.sqn by default)
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO Psequin(1).
NCBI 2011-09-02 ASNMACRO(1)