09-04-2007
That may have been a typo on my part. My program does write to output ok except for the fact that the double space comes out as a single space.
I'm going to ditch using the 'read' command and try using a combination of cat, grep and awk to rip through the file. If I do a :
REC_BUF=`grep '^' $1`
and then output to screen, the 2 spaces appear. Therefore I know it's a 'read' specific feature.
10 More Discussions You Might Find Interesting
1. UNIX for Dummies Questions & Answers
Hello,
Im using cygwin app which we use the bash shell for scripting.
Im trying to read a filename with consecutive spaces on the filename
ex: filename<space><space>1.txt
ls -lrt filename<space><space>1.txt is working but when I pull that from a file and place it into variable. it reads... (1 Reply)
Discussion started by: james_falco
1 Replies
2. Shell Programming and Scripting
I am searching while I await a response to this so if it has been asked already I apologize.
I have a file with lines in it that look like:
bob johnson email@email.org
I need it to look like:
bob:johnson:email@email.org
I am trying to use sed like this:
sed -e 's/ /:/g' file >... (5 Replies)
Discussion started by: NewSolarisAdmin
5 Replies
3. Shell Programming and Scripting
consider the small piece of code
while read line
do
echo $line
done < example
content of example file
sadasdasdasdsa erwerewrwr ergdgdfgf rgerg erwererwr
the output is like
sadasdasdasdsa erwerewrwr ergdgdfgf rgerg erwererwr
the... (4 Replies)
Discussion started by: Kesavan
4 Replies
4. UNIX for Dummies Questions & Answers
I am trying to read a txt file and trying to translate multiples spaces into single spaces so the file is more organized, but whenever I try the command:
tr ' ' ' ' w.txt
The output is:
tr: extra operand `w.txt'
Try `tr --help' for more information.
Can someone please help? :wall:
... (2 Replies)
Discussion started by: Nonito84
2 Replies
5. Shell Programming and Scripting
HI
i have written a script to ask input from the user.
this script should promote the user for y/n input. if user enters anyother input then y/n
the script promotes him again. this below code is working fine for all the cases.
except for space and enter " if i give space and enter it is... (2 Replies)
Discussion started by: BHASKARREDDY006
2 Replies
6. Shell Programming and Scripting
Hi, I want to read lines from a file, and I'm using two methods
1 use
while read line
do
done<filename
2 use
line=`sed -n '3p' filename`
however, in both of them, I notice that the tab between fields are automatically converted to space
because I want to use awk over the... (10 Replies)
Discussion started by: esolvepolito
10 Replies
7. Shell Programming and Scripting
hello,
suppose, entered input is of 1-40 bytes, i need it to be converted to 40 bytes exactly.
example: if i have entered my name anywhere between 1-40 i want it to be stored with 40 bytes exactly.
enter your name:
donald duck (this is of 11 bytes)
expected is as below - display 11... (3 Replies)
Discussion started by: shravan.300
3 Replies
8. UNIX for Dummies Questions & Answers
I am looking for a regular expression that uses sed to replace multiple spaces with single spaces on every line where it is not at the start of the line and not immediately before double slashes ('//') or between quotes (").
In its simplest form, it would look like this:
sed -e 's# # #g'... (4 Replies)
Discussion started by: figaro
4 Replies
9. Shell Programming and Scripting
All,
I come across the below requirement and my search on the previous posts did not result into any matches.
I have one column of data from a csv file like below. And I need to add additional column based on string count in first column.
Given column, Required column, Other columns
A, 1,... (8 Replies)
Discussion started by: ks_reddy
8 Replies
10. Shell Programming and Scripting
Hi All.
Attached are two files.
I ran a query and have the output as in the file with name "FILEWITHFOURRECORDS.txt "
I didn't want all the spaces between the columns so I squeezed the spaces with the "tr" command and also added a carriage return at the end of every line.
But in two... (3 Replies)
Discussion started by: sparks
3 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)
NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)