03-16-2007
Thankyou everybody for your precious time.
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1. Shell Programming and Scripting
I have a flat file like this
0001 THER ULT HEAD & NECK VES
0002 THER ULTRASOUND OF HEART
0003 THER ULT PERIPHERAL VES
0009 OTHER THERAPEUTIC ULTSND
0010 IMPLANT CHEMOTHERA AGENT
0011 INFUS DROTRECOGIN ALFA
0012 ADM INHAL NITRIC OXIDE
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2. Shell Programming and Scripting
Hi All,
I am giving an example similar to the problem I have.
I have two data files of 10 columns each in which fields are delimited by comma(,). I need to compare compare the two files using the uniq col(col3). If there are any records in file1 and are not in file2 then I have check the value... (3 Replies)
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3. Shell Programming and Scripting
Hi,
I need to compare two flat files (yesterday & today's data) and get only the changed data from flat files. In flat file i dont have data column or anything its just a string data in flat file.Can any one please let me know the script
With Regds
Shashi (3 Replies)
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4. Programming
Before i start doing something, I wanted to know whether the approach to compare XML file with UNIX file system structure. I have a pre-configured file(contains a list of paths to executables) and i need to check against the UNIX directory structure. what are the various approches should i use ? I... (6 Replies)
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5. Shell Programming and Scripting
Hi Frnds,
I have a flat file with millions of records. .
Now I on this. (I prefer for AWK as its gives good performance.)
Old_file.txt
------------------
1 gopi ase ....
2 arun pl ...
3 jack sutha ..
4 peter pm ..
...
New_file.txt
---------------
4 peter pm ..
..
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6. Shell Programming and Scripting
Hello,
I am strugling from quite a some time to compare flat files with over 1 million records could anyone please help me.
I want to compare two pipe delimited flat files, file1 with file2 and output the unmatched rows from file2 in file3
Sample File1:
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7. Shell Programming and Scripting
I have four files, I need to compare these files together.
As such i know "sdiff and comm" commands but these commands compare 2 files together. If I use sdiff command then i have to compare each file with other which will increase the codes.
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8. UNIX for Dummies Questions & Answers
Hi,
I'm a newbie to scripting and am trying to compare two files using awk.
The files are exactly the same dimensions. Where the first file has 0's I would like to create an updated version of the second file which has the corresponding elements set to zero also.
eg:
file1:
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9. Shell Programming and Scripting
compare to flat files using awk .but in 4th field contains non ordered substring. how to do that.
file1.txt
john|0.0|4|**:25;JP:50;UY:25
file2.txt
andy|0.0|4|JP:50;**:25;UY:25 (4 Replies)
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10. Shell Programming and Scripting
How to convert this:
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F2-R1 F2-R2 F2-R3
F3-R1 F3-R2 F3-R3
F4-R1 F4-R2 F4-R3is on one line with all fields for that record, put into an output file. The output file should look like this when converted:
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LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)
NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS
-c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)