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Full Discussion: Need help
Top Forums Shell Programming and Scripting Need help Post 302104659 by dsravan on Friday 26th of January 2007 12:07:27 PM
Old 01-26-2007
I tried using the script on one file and here is the o/p

Quote:
tr '\t' ' ' tables.telg.subs.txt | cut -d" " -f1
Usage: tr [ -cds ] [ String1 [ String2 ] ]
 
Bio::SeqFeature::Gene::NC_Feature(3pm)			User Contributed Perl Documentation		    Bio::SeqFeature::Gene::NC_Feature(3pm)

NAME
Bio::SeqFeature::Gene::NC_Feature.pm - superclass for non-coding features SYNOPSIS
Give standard usage here DESCRIPTION
Describe the object here FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: https://redmine.open-bio.org/projects/bioperl/ AUTHOR - David Block Email dblock@gnf.org APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ is_coding Title : is_coding Usage : if ($feature->is_coding()) { #do something } Function: Whether or not the feature codes for amino acid. Returns : FALSE Args : none cds Title : cds Usage : $cds=$feature->cds(); Function: get the coding sequence of this feature Returns : undef Args : none perl v5.14.2 2012-03-02 Bio::SeqFeature::Gene::NC_Feature(3pm)
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