Bio::Tools::Profile(3pm)				User Contributed Perl Documentation				  Bio::Tools::Profile(3pm)

NAME

       Bio::Tools::Profile - parse Profile output

SYNOPSIS

	use Bio::Tools::Profile;
	my $profile_parser = Bio::Tools::Profile->new(-fh =>$filehandle );
	while( my $profile_feat = $profile_parser->next_result ) {
	      push @profile_feat, $profile_feat;
       }

DESCRIPTION

	Parser for Profile output

FEEDBACK

   Mailing Lists
	User feedback is an integral part of the evolution of this and other
	Bioperl modules. Send your comments and suggestions preferably to
	the Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
       web:

	 https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Balamurugan Kumarasamy
	Email: fugui@worf.fugu-sg.org

APPENDIX

	The rest of the documentation details each of the object methods.
	Internal methods are usually preceded with a _

   new
	Title	: new
	Usage	: my $obj = Bio::Tools::Profile->new();
	Function: Builds a new Bio::Tools::Profile object
	Returns : Bio::Tools::Profile
	Args	: -filename
		  -fh ($filehandle)

   next_result
	Title	: next_result
	Usage	: my $feat = $profile_parser->next_result
	Function: Get the next result set from parser data
	Returns : L<Bio::SeqFeature::FeaturePair>
	Args	: none

   create_feature
	Title	: create_feature
	Usage	: my $feat= $profile_parser->create_feature($feature)
	Function: creates a Bio::SeqFeature::FeaturePair object
	Returns : L<Bio::SeqFeature::FeaturePair>
	Args	:

perl v5.14.2							    2012-03-02						  Bio::Tools::Profile(3pm)