10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I'm trying to remove '--X' from the whole file and using variables replace $oldvar with $newvar.
I have tried with double quotes but it doesn't seem to work. $newvar is set to /usr/bin/bash. Would appreciate some guidance.
newvar=$(which bash)
oldvar=/bin/bash
sed... (1 Reply)
Discussion started by: itman73
1 Replies
2. Emergency UNIX and Linux Support
Hello,
My input file1 is like this by tab-delimited
chr1 mm10_knownGene stop_codon 3216022 3216024 0.000000 - . gene_id "uc007aeu.1"; transcript_id "uc007aeu.1";
chr1 mm10_knownGene CDS 3216025 3216968 0.000000 - 2 gene_id "uc007aeu.1"; transcript_id "uc007aeu.1"; ... (3 Replies)
Discussion started by: jacobs.smith
3 Replies
3. UNIX for Beginners Questions & Answers
Dear Users,
Appreciate your help if you could help me with splitting a large file > 1 million lines with sed or awk. below is the text in the file
input file.txt
scaffold1 928 929 C/T +
scaffold1 942 943 G/C +
scaffold1 959 960 C/T +... (6 Replies)
Discussion started by: kapr0001
6 Replies
4. Shell Programming and Scripting
I have a bunch of file numbers in the file 'test':
I'm trying the above command to change all the instances of "H" to "Na+" in the file testsds.pdb at the line numbers indicated in the file 'test'. I've tried the following and various similar alternatives but nothing is working:
cat test |... (3 Replies)
Discussion started by: crunchgargoyle
3 Replies
5. Shell Programming and Scripting
Hi,
I am trying to use sed to replace a file path within all the .lay (.txt) files in a folder. I feel that this should be easy but I can't get it to work no matter what i try.
I'm using cygwin.
For a .txt file containing the below line I want to replace this file path with a new one.
... (1 Reply)
Discussion started by: carlr
1 Replies
6. Shell Programming and Scripting
We have 2 file XML files - FILE1.XML and FILE2.xml - we need copy the contents of FILE1.XML and replace in FILE2.xml pattern "<assignedAttributeList></assignedAttributeList>"
FILE1.XML
1. <itemList>
2. <item type="Manufactured">
3. <resourceCode>431048</resourceCode>
4. ... (0 Replies)
Discussion started by: balrajg
0 Replies
7. Shell Programming and Scripting
Hi Everyone,
I am new to this forum and new to sed/awk programming too !!
I need to find particular string in file1(text file) and replace it with a value from another text file(file2) the file2 has only one line and the value to be replaced with is in the second column.
file 1:
(assert (=... (21 Replies)
Discussion started by: paramad
21 Replies
8. Shell Programming and Scripting
Dear all,
I am trying to extract a number from a line in one file (task 1), duplicate another file (task 2) and replace all instances of the strings 300, in duplicated with the extracted number (task 3). Here is what I have tried so far:
for ((k=1;k<4;k++)); do
temp=`sed -n "${k}p"... (2 Replies)
Discussion started by: mnaqvi
2 Replies
9. Shell Programming and Scripting
How do i replace a string using sed into the same file without creating a intermediate file? (7 Replies)
Discussion started by: gomes1333
7 Replies
10. Shell Programming and Scripting
Hello and thx for reading this
I'm using sed to remove only the leading spaces in a file
bash-280R# cat foofile
some text
some text
some text
some text
some text
bash-280R#
bash-280R# sed 's/^ *//' foofile > foofile.use
bash-280R# cat foofile.use
some text
some text
some text... (6 Replies)
Discussion started by: laser
6 Replies