10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi,
I have a tab delimited file1:
NC_013499.1 3180 3269 GQ342961.1
NC_030295.1 5925 6014 FN398100.2
NC_007915.1 6307 6396 KU529284.1
NC_013499.1 5033 5122 GQ342961.1
And a second file2:
NC_030295.1 RefSeq gene 136 5115 ... (6 Replies)
Discussion started by: Ibk
6 Replies
2. Shell Programming and Scripting
Hi,
I have 2 csv files.
a.csv
HUAWEI,20LMG011_DEKET_1296_RTN-980_IDU-1-11-ISV3-1(to LAMONGAN_M),East_Java,20LMG011_DEKET_1296_RTN-980_IDU-1,20LMG011,20LMG
027_1287_LAMONGAN_RTN980_IDU1,20LMG027,1+1(HSB),195.675,20LMG011-20LMG027,99.9995,202.6952012... (7 Replies)
Discussion started by: tententen
7 Replies
3. Shell Programming and Scripting
My below code works fine if none of the columns has pipe as its content in it, If it has the pipe in any of the content then the value moves to the next column.
I wanted my code to work fine even if the column has pipe in it apart from the delimiter.
NOTE : If there is a pipe in the content... (6 Replies)
Discussion started by: nikhil jain
6 Replies
4. Shell Programming and Scripting
Good evening
I have the below requirements, as I am not an experts in Linux/Unix and am looking for your ideas how I can do this.
I have file called file1 and file2.
I need to get the second column which is text1_random_alphabets and find that in file 2, if it's exists then print the 3rd... (4 Replies)
Discussion started by: mychbears
4 Replies
5. Shell Programming and Scripting
Hi,
I hope somebody can help me with this problem, since I would like to solve this problem using awk, but im not experienced enough with this.
I have two files which i want to match, and output the matching column name and row number.
One file contains 4 columns like this:
FILE1:
a ... (6 Replies)
Discussion started by: Jenna.bos
6 Replies
6. Shell Programming and Scripting
Hello, I want pick up rows from input with conditions:
1) col2 is 2 replicate of col1 joint with "/"
2) col3 is a joint string as replicate of each side of the "/" symbol
3) col2 not equal to col3
input:
TG TG/TG TG/TGG
C C/C C/CG
C C/G CA/CA
C C/C CA/CA
AG AG/AG... (3 Replies)
Discussion started by: yifangt
3 Replies
7. Shell Programming and Scripting
I have a file like:
I would like to find lines lines with duplicate values in column 1, and retain only one based on two conditions: 1) keep line with highest value in column 3, 2) if column 3 values are equal, retain the line with the highest value in column 4.
Desired output:
I was able to... (3 Replies)
Discussion started by: pathunkathunk
3 Replies
8. Shell Programming and Scripting
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
Discussion started by: cyz700
3 Replies
9. Shell Programming and Scripting
Hi,
On a similar subject, the following. I have two files:
file1.txt
dbSNP_rsID,Chromosome,Position,Gene
rs10399749,chr. 01,45162,?
rs4030303,chr. 01,72434,?
rs4030300,chr. 01,72515,?
rs940550,chr. 01,78032,?
rs13328714,chr. 01,81468,?
rs11490937,chr. 01,222077,?
rs6683466,chr.... (5 Replies)
Discussion started by: swvanderlaan
5 Replies
10. UNIX for Dummies Questions & Answers
Hi,
I have two files:
file 1 has a list :
ABC_1024
ABC_4507
ABC_5589
ERT_4389
DDB_5507
file 2 has an array:
ABC_1011,ABC_1024,ABC_5670 DDB_4567 ERT_2345 January08
ABC_9099 DDB_9087 ERT_4567 March07
I need to go line by line in file 1... (2 Replies)
Discussion started by: greptastic
2 Replies
