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1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. Shell Programming and Scripting
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Discussion started by: lxdorney
8 Replies
3. UNIX for Dummies Questions & Answers
Hi,
I have a directory with a lot of files like this:
a.bam
b.bam
c.bam
I like to rename these files based on a list where the name of the files in the first column will be replasced by the names in the second column. Here is my list which is a tab-delimited text file:
a x
b y
c ... (4 Replies)
Discussion started by: a_bahreini
4 Replies
4. Shell Programming and Scripting
Is better way to write the script loop through one by one "Old_File_1: & New_File_1:" to copy 100 files to /staging/test folder then re-name & gzip all those files? I wrote this code below and don't like that much. Thanks
I have a control_file under /tmp/test folder like below 100 files and... (10 Replies)
Discussion started by: dotran
10 Replies
5. Shell Programming and Scripting
I have a sourcefile which contains data as below.I want to check whether datatype,structure and date format looks good as mentioned.
Data is delemited by cydila Ç.
Source file-Emp.txt
snoÇnameÇphonenoÇdeptÇjoineddate
1ÇvivekÇ0861ÇCSEÇ2013-05-29 00:00:00
2ÇdineshÇ123456ÇECEÇ2013-05-29 00:00:00... (8 Replies)
Discussion started by: katakamvivek
8 Replies
6. Shell Programming and Scripting
How can i rename list of files in a directory? (4 Replies)
Discussion started by: knip
4 Replies
7. Shell Programming and Scripting
I am currently writing a script in AIX
I connected to the database using SQL *PLUS
I need to retrive data of Number of rows inserted today in the table(TABLE_NAME) which has column DATETIME(DDMMYYYY)
I tried using
select TO_CHAR(sysdate, 'DDMMYYYY') CHRDATE from dual
select count (*)... (2 Replies)
Discussion started by: PhAnT0M
2 Replies
8. Shell Programming and Scripting
Hi,
I need to do something easy but I can't seem to figure out how to do this.
Let's say I have 6 files in the directory below:
/ebsbeta_f/flash/EBSUATQB/onlinelog
o1_mf_6_55klt7nr_.log
o1_mf_3_55klskj4_.log
o1_mf_4_55klsrl1_.log
o1_mf_5_55klt09p_.log
o1_mf_2_55klv1ts_.log... (10 Replies)
Discussion started by: exm
10 Replies
9. Shell Programming and Scripting
Hi Friend,
I have a small script to list all file FFAAAAABBBBB00001 and FFAAAAABBBBB00001.repaired (when I run another script, the orginal file will output another *.repaired file) in my unix directory, and reaname the output file FFAAAAABBBBB00001.repaired back to FFAAAABBBBB00001. However, it... (2 Replies)
Discussion started by: happyv
2 Replies
10. UNIX for Dummies Questions & Answers
Hi all,
I am a newbie in writng unix..I am using ksh shell..Does anyone know how to copy a list o files from directory A to directory B with differnt names? i.e
in Dir A, I have
RPT101.555.TXT
RPT102.666.TXT
and I want to copy those files to dir B with new naming convention..
in Dir B,... (7 Replies)
Discussion started by: kinmak
7 Replies
PAPS(1) General Commands Manual PAPS(1)
NAME
paps - UTF-8 to PostScript converter using Pango
SYNOPSIS
paps [options] files...
DESCRIPTION
paps reads a UTF-8 encoded file and generates a PostScript language rendering of the file. The rendering is done by creating outline curves
through the pango ft2 backend.
OPTIONS
These programs follow the usual GNU command line syntax, with long options starting with two dashes (`-'). A summary of options is
included below.
--landscape
Landscape output. Default is portrait.
--columns=cl
Number of columns output. Default is 1.
Please notice this option isn't related to the terminal length as in a "80 culums terminal".
--font=desc
Set the font description. Default is Monospace 12.
--rtl Do right to left (RTL) layout.
--paper ps
Choose paper size. Known paper sizes are legal, letter and A4. Default is A4.
Postscript points
Each postscript point equals to 1/72 of an inch. 36 points are 1/2 of an inch.
--bottom-margin=bm
Set bottom margin. Default is 36 postscript points.
--top-margin=tm
Set top margin. Default is 36 postscript points.
--left-margin=lm
Set left margin. Default is 36 postscript points.
--right-margin=rm
Set right margin. Default is 36 postscript points.
--gutter-width=gw
Set gutter width. Default is 40 postscript points.
--help Show summary of options.
--header
Draw page header for each page.
--markup
Interpret the text as pango markup.
--lpi Set the lines per inch. This determines the line spacing.
--cpi Set the characters per inch. This is an alternative method of specifying the font size.
--stretch-chars
Indicates that characters should be stretched in the y-direction to fill up their vertical space. This is similar to the texttops
behaviour.
AUTHOR
paps was written by Dov Grobgeld <dov.grobgeld@gmail.com>.
This manual page was written by Lior Kaplan <kaplan@debian.org>, for the Debian project (but may be used by others).
April 17, 2006 PAPS(1)