10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have this fastq file:
@M04961:22:000000000-B5VGJ:1:1101:9280:7106 1:N:0:86
GGGGGGGGGGGGCATGAAAACATACAAACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCA
+test-1
GGGGGGGGGGGGGGGGGCCGGGGGFF,EDFFGEDFG,@DGGCGGEGGG7DCGGGF68CGFFFGGGG@CGDGFFDFEFEFF:30CGAFFDFEFF8CAF;;8... (10 Replies)
Discussion started by: Xterra
10 Replies
2. Shell Programming and Scripting
Hi,
I hope you can help me out please?
I need to replace from character 8-16 with AAAAAAAA and the rest should stay the same after character 16
gtwrhtrd11111111rjytwyejtyjejetjyetgeaEHT
wrehrhw22222222hytekutkyukrylryilruilrGEQTH
hrwjyety33333333gtrhwrjrgkreglqeriugn;RUGNEURGU
... (4 Replies)
Discussion started by: stinkefisch
4 Replies
3. Shell Programming and Scripting
Hi,
I have a text file with some lines like this:
/MEDIA/DISK1/23568742.MOV
/MEDIA/DISK1/87456321.AVI
/MEDIA/DISK2/PART1/45753131.AVI
/IMPORT/44452.WAV
...
I want to remove the last 12 characters in each line that it ends "AVI". Should look like this:
/MEDIA/DISK1/23568742.MOV... (12 Replies)
Discussion started by: inaki
12 Replies
4. Shell Programming and Scripting
Hi,
I have a xml file (Config.xml)
<Header name="" TDate="" PDate="">
<Config>
{"config" { "Nation" "Pri:|Sec:"}}
</Config>
</Header>
Now I wanted to printed all the strings between "". I tried the following
cat Config.xml | sed -n 's/.*\.*//p'
... (8 Replies)
Discussion started by: vivek_damodaran
8 Replies
5. Shell Programming and Scripting
helloo
I wonder if there's a way to cut characters out of a string and keep only
the last 2 by using sed.
For example if there's the todays' date:
2012-05-06
and we only want to keep the last 2 characters which are the day.
Is there a quick way to do it with sed? (2 Replies)
Discussion started by: vlm
2 Replies
6. Shell Programming and Scripting
Hi
I would like to batch delete the "note" entry from bib files. The start would be defined by "note ={" and the end by "}." (see example bib entry below).
I tried the following command which does not have any effect:
cat input.bib| sed -e 's/note = {.*}.//' > output.bib
Any help would... (2 Replies)
Discussion started by: gerggeismann
2 Replies
7. Shell Programming and Scripting
Hi all,
I have the following lines
<b>A gtwrhwrthwr text hghthwrhtwrtw </b><font color='#06C'>; text text (text)
<b>B gtwrhwrthwr text hghthwrhtwrtw </b><font color='#06C'>; text text (text)
<b>J gtwrhwrthwr text hghthwrhtwrtw </b><font color='#06C'>; text text (text)
and I would like to... (5 Replies)
Discussion started by: stinkefisch
5 Replies
8. Shell Programming and Scripting
Hi There!
I have the following string
which i need to convert to
i.e. between each occurence of the delimiter ('|' in this case), i need to delete all characters from the '|' to the ':' so that |10,9:12/xxx| becomes |12/xxx|
How can i do this using sed?
Thanks in advance! (13 Replies)
Discussion started by: orno
13 Replies
9. Shell Programming and Scripting
Hopefully someone can help out here. This is probably fairly basic, but I've searched and tried several variations of the solutions presented in these forums, so I'll go ahead and ask.
How can I locate a string in a file, delete the characters after the string and then replace the string with a... (2 Replies)
Discussion started by: slaubhan
2 Replies
10. UNIX for Dummies Questions & Answers
Hi all!
Here is my problem : I have a string like the following :
20030613170404;BAN_CAV ; starting script Loader.sh on ; 13/06/2003 at ; 17;04;03
I want to eraze all characters located after "Loader.sh", because there are unuseful.
I tried to use sed...but it didnt work....i guess i... (1 Reply)
Discussion started by: HowardIsHigh
1 Replies
Graph(3pm) User Contributed Perl Documentation Graph(3pm)
NAME
SVG::Graph - Visualize your data in Scalable Vector Graphics (SVG) format.
SYNOPSIS
use SVG::Graph;
use SVG::Graph::Data;
use SVG::Graph::Data::Datum;
#create a new SVG document to plot in...
my $graph = SVG::Graph->new(width=>600,height=>600,margin=>30);
#and create a frame to hold the data/glyphs
my $frame = $graph->add_frame;
#let's plot y = x^2
my @data = map {SVG::Graph::Data::Datum->new(x=>$_,y=>$_^2)}
(1,2,3,4,5);
my $data = SVG::Graph::Data->new(data => @data);
#put the xy data into the frame
$frame->add_data($data);
#add some glyphs to apply to the data in the frame
$frame->add_glyph('axis', #add an axis glyph
'x_absolute_ticks' => 1, #with ticks every one
#unit on the x axis
'y_absolute_ticks' => 1, #and ticks every one
#unit on the y axis
'stroke' => 'black', #draw the axis black
'stroke-width' => 2, #and 2px thick
);
$frame->add_glyph('scatter', #add a scatterplot glyph
'stroke' => 'red', #the dots will be outlined
#in red,
'fill' => 'red', #filled red,
'fill-opacity' => 0.5, #and 50% opaque
);
#print the graphic
print $graph->draw;
DESCRIPTION
SVG::Graph is a suite of perl modules for plotting data. SVG::Graph currently supports plots of one-, two- and three-dimensional data, as
well as N-ary rooted trees. Data may be represented as:
Glyph Name Dimensionality supported
1d 2d 3d tree
--------------------------------------------------------
Axis x
Bar Graph x
Bubble Plot x
Heatmap Graph x
Line Graph x
Pie Graph x
Scatter Plot x
Spline Graph x
Tree x
SVG::Graph 0.02 is a pre-alpha release. Keep in mind that many of the glyphs are not very robust.
PLOTTING
You need to create a SVG::Graph::Frame instance from the parent SVG::Graph instance for each set of data to be plotted. Datasets can be
hierarchical, and to represent this, SVG::Graph::Frame instances can themselves contain subframes. SVG::Graph::Frame can contain:
- multiple subframes as instances of SVG::Graph::Frame
- a single SVG::Graph::Data instance
- multiple SVG::Graph::Glyph instances with which to render
the attached SVG::Graph::Data instance, and all SVG::Graph::Data
instances attached to SVG::Graph::Frame subinstances
See SVG::Graph::Frame and SVG::Graph::Glyph for details.
ONE DATA SET
1. create an SVG::Graph instance
2. create an SVG::Graph::Frame instance by calling
SVG::Graph::add_frame();
3. create an SVG::Graph::Data instance, containing
an SVG::Graph::Data::Datum instance for each data point.
4. Attach the SVG::Graph::Data instance to your SVG::Graph::Frame
using SVG::Graph::Frame::add_data();
5. Attach glyphs to the SVG::Graph::Frame instance using
SVG::Graph::Frame::add_glyph();
6. Call SVG::Graph::draw();
MULTIPLE DATA SETS
1. create an SVG::Graph instance
2. create an SVG::Graph::Frame instance by calling
SVG::Graph::add_frame();
3. create an SVG::Graph::Data instance, containing
an SVG::Graph::Data::Datum instance for each data point.
4. Attach the SVG::Graph::Data instance to your SVG::Graph::Frame
using SVG::Graph::Frame::add_data();
5. Attach glyphs to the SVG::Graph::Frame instance using
SVG::Graph::Frame::add_glyph();
6. repeat [2-5] for each additional data set to be added.
add_frame() can be called on SVG::Graph to add top-level data
sets, or SVG::Graph::Frame to add hierarchical data sets.
7. Call SVG::Graph::draw();
FEEDBACK
Send an email to the svg-graph-developers list. For more info, visit the project page at http://www.sf.net/projects/svg-graph
AUTHORS
Allen Day, <allenday@ucla.edu>
Chris To, <crsto@ucla.edu>
CONTRIBUTORS
James Chen, <chenj@seas.ucla.edu>
Brian O'Connor, <boconnor@ucla.edu>
SEE ALSO
SVG
METHODS
new
Title : new
Usage : my $graph = SVG::Graph->new(width=>600,
height=>600,
margin=>20);
Function: creates a new SVG::Graph object
Returns : a SVG::Graph object
Args : width => the width of the SVG
height => the height of the SVG
margin => margin for the root frame
init
Title : init
Usage :
Function:
Example :
Returns :
Args :
width
Title : width
Usage : $obj->width($newval)
Function:
Example :
Returns : value of width (a scalar)
Args : on set, new value (a scalar or undef, optional)
height
Title : height
Usage : $obj->height($newval)
Function:
Example :
Returns : value of height (a scalar)
Args : on set, new value (a scalar or undef, optional)
margin
Title : margin
Usage : $obj->margin($newval)
Function:
Example :
Returns : value of margin (a scalar)
Args : on set, new value (a scalar or undef, optional)
svg
Title : svg
Usage : $obj->svg($newval)
Function:
Example :
Returns : value of svg (a scalar)
Args : on set, new value (a scalar or undef, optional)
add_frame
Title : add_frame
Usage : my $frame = $graph->add_frame
Function: adds a Frame to the current Graph
Returns : a SVG::Graph::Frame object
Args : a hash. usable keys:
frame_transform (optional)
'top' default orientation
'bottom' rotates graph 180 deg (about the center)
'right' points top position towards right
'left' points top position towards left
frames
Title : frames
Usage : get/set
Function:
Example :
Returns :
Args :
xoffset
Title : xoffset
Usage : $obj->xoffset($newval)
Function:
Example :
Returns : value of xoffset (a scalar)
Args : on set, new value (a scalar or undef, optional)
yoffset
Title : yoffset
Usage : $obj->yoffset($newval)
Function:
Example :
Returns : value of yoffset (a scalar)
Args : on set, new value (a scalar or undef, optional)
draw
Title : draw
Usage : $graph=>draw
Function: depends on child glyph implementations
Returns : xmlifyied SVG object
Args : none
perl v5.10.0 2009-01-07 Graph(3pm)