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My problem is the implementation. I want to try programming using some available "libraries". I appreciate any code example on top of mine. This sounds lazy, but I'm self-learning by practice. Of...

Your reply reminds me of two ideas that bug me a lot, or I have been trying to catch to handle fasta files. 1) Use some sort of index (hashing? FM-index?); 2) use suffix array, tree or trie to do the...

achenle, I do not know what happened, but it is fine with my vim/gedit, and good viewed with cat/more/less/head etc on my Linux console: ubuntu/Mint 17.0.

corona688, can I make sure the difference...

Hello,
Attached is my very simple C++ code to remove any substrings (DNA sequence) of each other, i.e. any redundant sequence is removed to get unique sequences. Similar to sort | uniq command...