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AMBER md/g95/gfortran issue

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Operating Systems Linux Red Hat AMBER md/g95/gfortran issue
# 1  
Old 02-20-2009
AMBER md/g95/gfortran issue
Hi,
i am trying to install AMBER10 which is a molecular dynamcis package onto two linux red hat pcs. I can successfully install the tools that comes with which uses gcc to compile, however AMBER10 requires either g95 or gfortran to compile. This is where the issue lies, i have installed both gfortran and g95 and and try to compile and i get this response,


./configure_amber gfortran
Setting AMBERHOME to /usr/local/amber10

Setting up Amber configuration file for architecture: gfortran
Using parallel communications library: none
The MKL_HOME environment variable is not defined.

Testing the C compiler:
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -O2 -m32 -o testp testp.c
OK

Testing the Fortran compiler:
gfortran -O0 -fno-range-check -fno-second-underscore -o testp testp.f
./configure_amber: line 1168: gfortran: command not found
./configure_amber: line 1169: ./testp: No such file or directory
Unable to compile a Fortran program using gfortran -O0 -fno-range-check -fno-second-underscore
Please check your compiler settings or configure flags.

I have set path = $path .... in my .cshrc and i when i type g95 by itself i get,

Fatal error: need a file to compile

Not sure whats happening any help is greatly appreciated. Thanks

Andrew
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LEARN ABOUT ULTRIX

kernel-install

KERNEL-INSTALL(8)						  kernel-install						 KERNEL-INSTALL(8)

NAME

       kernel-install - Add and remove kernel and initramfs images to and from /boot

SYNOPSIS

       kernel-install COMMAND KERNEL-VERSION [KERNEL-IMAGE]

DESCRIPTION

       kernel-install is used to install and remove kernel and initramfs images to and from /boot.

       kernel-install will execute the files located in the directory /usr/lib/kernel/install.d/ and the local administration directory
       /etc/kernel/install.d/. All files are collectively sorted and executed in lexical order, regardless of the directory in which they live.
       However, files with identical filenames replace each other. Files in /etc/kernel/install.d/ take precedence over files with the same name
       in /usr/lib/kernel/install.d/. This can be used to override a system-supplied executables with a local file if needed; a symbolic link in
       /etc/kernel/install.d/ with the same name as an executable in /usr/lib/kernel/install.d/, pointing to /dev/null, disables the executable
       entirely. Executables must have the extension ".install"; other extensions are ignored.

       An executable should return 0 on success. It may also return 77 to cause the whole operation to terminate (executables later in lexical
       order will be skipped).

COMMANDS

       The following commands are understood:

       add KERNEL-VERSION KERNEL-IMAGE
	   kernel-install creates the directory /boot/MACHINE-ID/KERNEL-VERSION/ and calls executables from /usr/lib/kernel/install.d/*.install
	   and /etc/kernel/install.d/*.install with the arguments

	       add KERNEL-VERSION 
		   /boot/MACHINE-ID/KERNEL-VERSION/ KERNEL-IMAGE

	   The kernel-install plugin 50-depmod.install runs depmod for the KERNEL-VERSION.

	   The kernel-install plugin 90-loaderentry.install copies KERNEL-IMAGE to /boot/MACHINE-ID/KERNEL-VERSION/linux. It also creates a boot
	   loader entry according to the boot loader specification in /boot/loader/entries/MACHINE-ID-KERNEL-VERSION.conf. The title of the entry
	   is the PRETTY_NAME parameter specified in /etc/os-release or /usr/lib/os-release (if the former is missing), or "Linux KERNEL-VERSION",
	   if unset. If the file initrd is found next to the linux file, the initrd will be added to the configuration.

       remove KERNEL-VERSION
	   Calls executables from /usr/lib/kernel/install.d/*.install and /etc/kernel/install.d/*.install with the arguments

	       remove KERNEL-VERSION /boot/MACHINE-ID/KERNEL-VERSION/

	   kernel-install removes the entire directory /boot/MACHINE-ID/KERNEL-VERSION/ afterwards.

	   The kernel-install plugin 90-loaderentry.install removes the file /boot/loader/entries/MACHINE-ID-KERNEL-VERSION.conf.

EXIT STATUS

       If every executable returns 0 or 77, 0 is returned, and a non-zero failure code otherwise.

FILES

       /usr/lib/kernel/install.d/*.install /etc/kernel/install.d/*.install
	   Drop-in files which are executed by kernel-install.

       /etc/kernel/cmdline /proc/cmdline
	   The content of the file /etc/kernel/cmdline specifies the kernel command line to use. If that file does not exist, /proc/cmdline is
	   used.

       /etc/machine-id
	   The content of the file specifies the machine identification MACHINE-ID.

       /etc/os-release /usr/lib/os-release
	   The content of the file specifies the operating system title PRETTY_NAME.

SEE ALSO

       machine-id(5), os-release(5), Boot loader specification[1]

NOTES

	1. Boot loader specification
	   https://www.freedesktop.org/wiki/Specifications/BootLoaderSpec

systemd 237															 KERNEL-INSTALL(8)