mrbayes(1) User Commands mrbayes(1)NAME
mb-mpi - A program for the Bayesian estimation (parallel version)
SYNOPSIS
mb-mpi [OPTION]... [FILE]...
DESCRIPTION
A program for the Bayesian estimation of phylogeny Bayesian inference of phylogeny
OPTIONS -i interactive mode
mrbayes 3.1.2 Nov 2006 mrbayes(1)
Check Out this Related Man Page
TRICENSUS-MPI-STATUS(1) The Regina Handbook TRICENSUS-MPI-STATUS(1)NAME
tricensus-mpi-status - Summarise the log file of an MPI census of triangulations
SYNOPSIS
tricensus-mpi-status log-file
DESCRIPTION
This utility reads a log file produced by a tricensus-mpi job, and writes a human-readable summary to standard output. It can be used for
either jobs that have finished or jobs that are still running, and it can happily read logs that have been compressed using gzip or bzip2.
The logs produced by tricensus-mpi are very detailed, including timestamps, details of which slaves have taken which tasks, and how many
triangulations each task has produced. This utility distills this detailed log into an easy-to-read summary, with one line for each face
pairing.
Output will only appear for face pairings that have been examined so far (which includes face pairings still being processed). This output
will include:
o whether processing for each face pairing has finished;
o the number of triangulations found so far for each face pairing;
o the number of subsearches generated and/or finished for each face pairing (only relevant when running in subsearch mode).
The final line of output will list the total number of triangulations found so far, whether the census has finished, and if not, when the
last log entry was written.
For further explanation of the terminology used above, see the tricensus-mpi reference.
EXAMPLES
See the tricensus-mpi reference for a sample session in which tricensus-mpi-status is used.
MACOS X AND WINDOWS USERS
This utility is not shipped with the drag-and-drop app bundle for MacOS X or with the Windows installer.
SEE ALSO
tricensus-mpi, regina-gui.
AUTHOR
This utility was written by Benjamin Burton <bab@debian.org>. Many people have been involved in the development of Regina; see the users'
handbook for a full list of credits.
28 May 2012 TRICENSUS-MPI-STATUS(1)
I have a huge matrix file containing some 1.5 million rows and 6000 columns. The matrix looks something like this:
1 2 3
4 5 6
7 8 9
3 4 5
I want to add all the numbers in the columns of this matrix and display the result to my stdout. This means that the numbers in the first column are:
... (2 Replies)
Hi,
Just trying to get to grips with sed and awk for some reporting for work and I need some assistance:
I have a file that lists policy names on the first line and then on the second line whether the policy is active or not.
Policy Name: Policy1
Active: yes
Policy... (8 Replies)
version info :
vi availabe with RHEL 5.4
I have a text file with 10,000 lines. I want to copy lines from 5000th line to 7000th and redirect to a file. Any idea how I can do this?
Note:
The above scenario is just an example. In my actual requirement, the file has 14 million lines and I want... (9 Replies)
Hi everyone,
I know the following questions are noobish questions but I am asking them because I am confused about the basics of history behind UNIX and LINUX.
Ok onto business, my questions are-:
Was/Is UNIX ever an open source operating system ?
If UNIX was... (21 Replies)
Hello,
I couldn't find an actual introduction thread, so I decided to just put this here.
I go by d0wngrade online. I have been programming in multiple languages for about 15+ years. I started with standard web design languages like HTML and CSS, but I then advanced from design to development... (2 Replies)
Hi guys...
The first active code line in AudioScope.sh is set -u .
This causes a complete exit if a variable is used/found but has not been allocated at the start of the program.
However, apart from writing code to do the task, is there a switch to to check which variables have been... (17 Replies)
Hi.
In thread https://www.unix.com/shell-programming-and-scripting/267833-grouping-counting.html rovf and I had a mini-discussion on grep and awk.
Here is a demo script that compares the awk and grep approaches for this single problem:
#!/usr/bin/env bash
# @(#) s2 Demonstrate group... (1 Reply)
Hello,
I have to fish out some specific columns from a file based on the header value. I have the list of columns I need in a different file. I thought I could read in the list of headers I need,
# file with header names of required columns in required order
headers_file=$2
# read contents... (11 Replies)
For those interested in installing dash shell on OSX Lion to help test POSIX compliancy of shell scripts, it is quite easy. I did it like this:
If you don't have gcc on your system:
0. Download and install the Command Line Tools for Xcode package from Sign In - Apple *
1. Download the dash... (2 Replies)
Hello and thanks in advance for any help anyone can offer me
I'm trying to learn the find command and thought I was understanding it... Apparently I was wrong. I was doing compound searches and I started getting weird results with the -size test. I was trying to do a search on a 1G file owned by... (14 Replies)
I have data of an excel files as given below,
file1
org1_1 1 1 2.5 100
org1_2 1 2 5.5 98
org1_3 1 3 7.2 88
file2
org2_1 1 1 2.5 100
org2_2 1 2 5.5 56
org2_3 1 3 7.2 70
I have multiple excel files as above shown.
I have to copy column 1, column 4 and paste into a new excel file as... (26 Replies)
Dear All,
Taking a break from Vue.js coding for the site, SEO and YT videos; and hopefully addressing some well deserved criticism from some here that I have been too focused on the visual aspects of the forums versus the substance and the community....
While the "current generation... (9 Replies)
Hi all...
Well guys and gals, I jumped in at the deep end and found things that PERL cannot do by default.
Many tricky terminal escape codes are not catered for so I had to create workarounds.
One thing I searched for was this:
Passing perl variable to shell command
AND, @Neo this was... (15 Replies)