I found and downloaded this hxxp://www.activestate.com/activeperl/downloads , but I am totally beginner about, what the way to use your script? Where can I input my files? Excuseme if I am asking really simple questions for you totally clear.
Save the snippet I posted as merge_xml.pl
Run at the command prompt as perl merge_xml.pl file1.xml file2.xml file3.xml > big.xml
This suggested code will accommodate as many files as you want to merge. It uses the following entries as unique ID
Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:
File A: (tab-delimited)
PDB CHAIN Start End Fragment
1avq A 171 176 awyfan
1avq A 172 177 wyfany
1c7k A 2 7... (3 Replies)
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
I have file1.txt
BGE179W1
BGE179W2
BGE179W3
BGE187W1
BGE187W2
BGE187W3
BGE194W1
BGE194W2
BGE194W3
BGE227W1
BGE227W2
BGE227W3
BGE288W1
BGE288W2
BGE288W3
BGE650W1
---------- Post updated at 12:41 AM ---------- Previous update was at 12:39 AM ---------- (5 Replies)
Hello everybody,
I have a double mission with some XML files, which is pretty challenging for my actual beginner UNIX knowledge. I need to extract some strings from multiple XML files and create a new XML file with the searched strings..
The original XML files contain the source code for... (12 Replies)
Hi Everyone,
I'm new here and I was checking this old post:
/shell-programming-and-scripting/180669-splitting-file-into-several-smaller-files-using-perl.html
(cannot paste link because of lack of points)
I need to do something like this but understand very little of perl.
I also check... (4 Replies)
Hi,
I'm having a xml file with multiple xml header. so i want to split the file into multiple files.
Sample.xml consists multiple headers so how can we split these multiple headers into multiple files in unix.
eg :
<?xml version="1.0" encoding="UTF-8"?>
<ml:individual... (3 Replies)
Hi all,
I need help to parse this xml file that has paragraphs broken in different lines and I would like to join in a single line.
I hope you can understand my explanation. Thanks for any help/direction.
The script could be in bash, awk, ruby, perl whatever please
In the output I want:... (8 Replies)
Hello,
This post is already here but want to do this with another way
Merge multiples files with multiples duplicates keys by filling "NULL" the void columns for anothers joinning files
file1.csv:
1|abc
1|def
2|ghi
2|jkl
3|mno
3|pqr
file2.csv:
1|123|jojo
1|NULL|bibi... (2 Replies)
Discussion started by: yjacknewton
2 Replies
LEARN ABOUT DEBIAN
stag-parse
STAG-PARSE(1p) User Contributed Perl Documentation STAG-PARSE(1p)NAME
stag-parse - parses a file and fires events (e.g. sxpr to xml)
SYNOPSIS
# convert XML to IText
stag-parse -p xml -w itext file1.xml file2.xml
# use a custom parser/generator and a custom writer/generator
stag-parse -p MyMod::MyParser -w MyMod::MyWriter file.txt
DESCRIPTION
script wrapper for the Data::Stag modules
feeds in files into a parser object that generates nestarray events, and feeds the events into a handler/writer class
ARGUMENTS
-p|parser FORMAT
FORMAT is one of xml, sxpr or itext, or the name of a perl module
this is the class that parsers the input file(s) and generates stag events
xml assumed as default
-w|writer FORMAT
FORMAT is one of xml, sxpr or itext, or the name of a perl module
this is the class that catches the events thrown by the parser; it can be any class, but the class is typically a writer
xml assumed as default
-o|out FILE
the writer will use this file (defaults to STDOUT)
-e|errf FILE
file to store parse error handler output
-errhandler FORMAT/MODULE
FORMAT is one of xml, sxpr or itext, or the name of a perl module
all parse error events go to this module
-r|root NODE_NAME
if this is specified, NODE_NAME becomes the root of the stag tree, and anything that was previously the root is placed below this.
this happens automatically if more than one file is parsed (because there can only be one tree root)
-color
Works only if the output handler is able to provide ASCII-colors (currently supported for itext and xml)
SEE ALSO
Data::Stag
This script is a wrapper for the method
Data::Stag->parse()
perl v5.10.0 2008-12-23 STAG-PARSE(1p)