First, thanks for the help in previous posts... couldn't have gotten where I am now without it!
So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following:
If $1... (4 Replies)
Hi,
I appreciate all who have been very helpful to me in providing valuable suggestions and replies.
I want to write a script to look up a file and match the contents. Let me go through the scenario. Lets say i have two files
Content file:
abc, bcd, adh|bcdf|adh|wed
bcf, cdf,... (2 Replies)
Hi Friends,
I'm a great fan of this forum... it has helped me tone my skills in shell scripting. I have a challenge here, which I'm sure you guys would help me in achieving...
File A has a list of job ids and I need to compare this with the File B (*.log) and File C (extend *.log) and copy... (6 Replies)
Hi All,
I don't know how to fast do this field replace that need lookup from another file to form the update result:confused:
I want to do it by general shell script
Can anyone help to solve it ? Thanks for your kindly reply in advance.
CK (0 Replies)
Hi,
I have two questions which I would massively appreciate help with.
1.
I am trying to insert a field into a file similar to the vlookup function in excel. In column 2 is a gene id for which i would like to insert the full name in the adjacent column. I have a map file (map.file) which... (1 Reply)
not getting anywhere with this
an xml file contains multiple clients set up with same tags, different values.
I need to parse the file for client foo, and change the value of tag "64bit" from false to true.
cat clients.xml
<Client type"FIX">
<ClientName>foo</ClientName>... (3 Replies)
If $1 in file1 matches $2 in file2. Then the value in $2 of file2 is updated to $1"."$2 of file2. The awk seems to only match the two files but not update. Thank you :).
awk
awk 'NR==FNR{A ; next} $1 in A { $2 = a }1' file1 file2
file1
name version
NM_000593 5
NM_001257406... (3 Replies)
The below awk uses $3 and $4 in search as the min and max, then takes each $2 value in lookup and compares it. If the value in lookupfalls within the range in searchthen it prints the entire line in lookup/ICODE]. What I can't seem to figure out is how to print the matching $5 from search on that... (4 Replies)
I am trying to use awk to match two files that are tab-delimited. When a match is found between file1 $1 and file2 $4, $4 in file2 is updated using the $2 value in file1. If no match is found then the next line is processed. Thank you :).
file1
uc001bwr.3 ADC
uc001bws.3 ADC... (4 Replies)
I cannot seem to get what should be a simple awk one-liner to work correctly and cannot figure out why. I would like to use patterns from a specific field in one file as regex to search for matching strings in the entire line ($0) of another file.
I would like to output the lines of File2 which... (1 Reply)
Discussion started by: jvoot
1 Replies
LEARN ABOUT V7
join
JOIN(1) General Commands Manual JOIN(1)NAME
join - relational database operator
SYNOPSIS
join [ options ] file1 file2
DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard
input is used.
File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in
each line.
There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con-
sists of the common field, then the rest of the line from file1, then the rest of the line from file2.
Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis-
carded.
These options are recognized:
-an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2.
-e s Replace empty output fields by string s.
-jn m Join on the mth field of file n. If n is missing, use the mth field in each file.
-o list
Each output line comprises the fields specifed in list, each element of which has the form n.m, where n is a file number and m is a
field number.
-tc Use character c as a separator (tab character). Every appearance of c in a line is significant.
SEE ALSO sort(1), comm(1), awk(1)BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort.
The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous.
JOIN(1)