06-27-2011
Neither your statments , nor you sample data explains the problem fully.
Please use code tags when you post the sample data.
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LEARN ABOUT DEBIAN
go::model::geneproduct
GO::Model::GeneProduct(3pm) User Contributed Perl Documentation GO::Model::GeneProduct(3pm)
NAME
GO::Model::GeneProduct - gene product in a particular species
DESCRIPTION
represents a gene product in a particular species (this will effectively always be refered to implicitly by the gene symbol even though a
gene may have >1 product)
acc
Usage -
Returns -
Args -
symbol
Usage -
Returns -
Args -
type
Usage -
Returns -
Args -
full_name
Usage -
Returns -
Args -
as_str
Usage -
Returns -
Args -
add_synonym
synonym_list
accessor: gets/set list of synonyms [array reference]
speciesdb
Usage -
Returns -
Args -
add_seq
Usage -
Returns -
Args - GO::Model::Seq
seq_list
Usage -
Returns - GO::Model::Seq listref
Args -
seq
Usage -
Returns - GO::Model::Seq
Args -
returns representative sequence object for this product
properties
Usage -
Returns - hashref
Args - hashref
set_property
Usage - $sf->set_property("wibble", "on");
Returns -
Args - property key, property scalar
note: the property is assumed to be multivalued, therefore
$sf->set_property($k, $scalar) will add to the array, and
$sf->set_property($k, $arrayref) will set the array
get_property
Usage -
Returns - first element of the property
Args - property key
get_property_list
Usage -
Returns - the property arrayref
Args - property key
to_fasta
Usage -
Returns -
Args -
returns the longest seq by default
perl v5.14.2 2013-02-07 GO::Model::GeneProduct(3pm)