02-20-2011
Thanks for the info
Helpful website but I still need and AWK script that I can modify and couple with all my other steps in my bash script.
Any help will be greatly appreciate it!
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1. Shell Programming and Scripting
Hi,
Is there any way to change one date format to another ?? I mean I have a file having dates in the format (Thu Sep 29 2005) ... and i wud like to change these to YYYYMMDD format .. is there any command which does so ?? Or anything like enum which we have in C ??
Thanks in advance,
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Hi,
There are lots of threads about how to manipulate the date using date +%m %.......
But how can I change the default format of the commad date?
$ date
Mon Apr 10 10:57:15 BST 2006
This would be on fedora and SunOs.
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Dear Experts,
Currently my script is gereating the output like this as mentioned below.
8718,8718,0,8777
7450,7450,0,7483
5063,5063,0,5091
3840,3840,0,3855
3129,3129,0,3142
2400,2400,0,2419
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Hi,
I'm in need of creating a file in the fasta format:
>1A6A.A
HVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITN
VPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCR
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atatagcaga
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atatagcagaatatatat
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LEARN ABOUT DEBIAN
fastautils
fastautils(1) FASTA format file manipulation utilities fastautils(1)
NAME
fastautils - FASTA format file manipulation utilities
SYNOPSIS
fastachecksum [ options ] <input file>
fastaclean
fastaclip
fastacomposition
fastadiff
fastaexplode
fastafetch
fastahardmask
fastaindex
fastalength
fastanrdb
fastaoverlap
fastareformat
fastaremove
fastarevcomp
fastasoftmask
fastasort
fastasplit
fastasubseq
fastatranslate
fastavalidcds
DESCRIPTION
These are utilities for the manipulation of FASTA format sequence databases which are distributed with the exonerate sequence alignment
program.
ENVIRONMENT
Not documented yet.
EXAMPLES
fastalength sequence.fasta
blah blah
VERSION
This documentation accompanies version 2.2.0 of the exonerate package.
AUTHOR
Guy St.C. Slater. <guy@ebi.ac.uk>. See the AUTHORS file accompanying the source code for a list of contributors.
AVAILABILITY
This source code for the exonerate package is available under the terms of the GNU general public licence.
Please see the file COPYING which was distrubuted with this package, or http://www.gnu.org/licenses/gpl.txt for details.
This package has been developed as part of the ensembl project. Please see http://www.ensembl.org/ for more information.
SEE ALSO
exonerate(1),e-PCR
fastautils March 2003 fastautils(1)