Adding a column to a text file based on mathematical manipulation


 
Thread Tools Search this Thread
Top Forums UNIX for Dummies Questions & Answers Adding a column to a text file based on mathematical manipulation
# 1  
Old 08-22-2012
Adding a column to a text file based on mathematical manipulation

Hi,

I have a tab delimited text file with three different columns. I want to add an extra column to the text file. The extra column will be the second column and it will equal third column - 1. How do I go about doing that? Thanks!

Input:
Code:
chr1    788822  rs11240777
chr1    1008567 rs9442372
chr1    1148140 rs3813199
chr1    1148494 rs6603781

Output:
Code:
chr1  788821  788822  rs11240777
chr1  1008566  1008567 rs9442372
chr1  1148139  1148140 rs3813199
chr1  1148493  1148494 rs6603781

# 2  
Old 08-22-2012
If the file is fixed in this format, then here's an easy way:

Code:
awk '{print $1"\t"$2-1"\t"$2"\t"$3}' file 

chr1	788821	            788822	           rs11240777
chr1	1008566	1008567	rs9442372
chr1	1148139	1148140	rs3813199
chr1	1148493	1148494	rs6603781

# 3  
Old 08-24-2012
Code:
awk '{print $1,$2-1,$2,$3}' filename

 
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Adding values of a column based on another column

Hello, I have a data such as this: ENSGALG00000000189 329 G A 4 2 0 ENSGALG00000000189 518 T C 5 1 0 ENSGALG00000000189 1104 G A 5 1 0 ENSGALG00000000187 3687 G T 5 1 0 ENSGALG00000000187 4533 A T 4 2 0 ENSGALG00000000233 5811 T C 4 2 0 ENSGALG00000000233 5998 C A 5 1 0 I want to... (3 Replies)
Discussion started by: Homa
3 Replies

2. UNIX for Dummies Questions & Answers

Solaris - Filter columns in text file and adding new column

Hello, I am very now to this, hope you can help, I am looking into editing a file in Solaris, with dinamic collums (lenght varies) and I need 2 things to be made, the fist is to filter the first column and third column from the file bellow file.txt, and create a new file with the 2 filtered... (8 Replies)
Discussion started by: jpbastos
8 Replies

3. UNIX for Dummies Questions & Answers

Mathematical manipulation of a text file

I have a tab delimited file with 4 columns. If the value in the first column, equals the value in the second column, I'd like to have the 4th column multiplied by 2 then add 1. If the value in the first column differs from the value in the second, I'd like to have the 4th column multiplied by 2... (5 Replies)
Discussion started by: evelibertine
5 Replies

4. UNIX for Dummies Questions & Answers

Adding a column to a text file with row numbers

Hi, I would like to add a new column containing the row numbers to a text file. How do I go about doing that? Thanks! Example input: A X B Y C D Output: A X 1 B Y 2 C D 3 (5 Replies)
Discussion started by: evelibertine
5 Replies

5. UNIX for Dummies Questions & Answers

How to cut from a text file based on value of a specific column?

Hi, I have a tab delimited text file from which I want to cut out specific columns. If the second column equals one, I want to cut out columns 1 and 5 and 6. If the second column equals two, I want to cut out columns 1 and 5 and 7. How do I go about doing that? Thanks! (4 Replies)
Discussion started by: evelibertine
4 Replies

6. UNIX for Dummies Questions & Answers

Adding tags to a specific column of a space delimited text file

I have a space delimited text file with two columns. I would like to add NA to the first column of the text file. Input: 19625 10.4791768259 19700 10.8146489183 19701 10.9084026759 19702 10.9861346978 19703 10.9304364984 Output: NA19625 10.4791768259 NA19700 10.8146489183... (1 Reply)
Discussion started by: evelibertine
1 Replies

7. Shell Programming and Scripting

sorting based on a specified column in a text file

I have a tab delimited file with 5 columns 79 A B 20.2340 6.1488 8.5086 1.3838 87 A B 0.1310 0.0382 0.0054 0.1413 88 A B 46.1651 99.0000 21.8107 0.2203 89 A B 0.1400 0.1132 0.0151 0.1334 114 A B 0.1088 0.0522 0.0057 0.1083 115 A B... (2 Replies)
Discussion started by: Lucky Ali
2 Replies

8. Shell Programming and Scripting

Help with File processing - Adding predefined text to particular record based on condition

I am generating a output: Name Count_1 Count_2 abc 12 12 def 15 14 ghi 16 16 jkl 18 18 mno 7 5 I am sending the output in html email, I want to add the code: <font color="red"> NAME COLUMN record </font> for the Name... (8 Replies)
Discussion started by: karumudi7
8 Replies

9. UNIX for Dummies Questions & Answers

Extracting rows from a text file based on the first column

I have a tab delimited text file where the first column can take on three different values : 100, 150, 250. I want to extract all the rows where the first column is 100 and put them into a separate text file and so on. This is what my text file looks like now: 100 rs3794811 0.01 0.3434... (1 Reply)
Discussion started by: evelibertine
1 Replies

10. Shell Programming and Scripting

Adding a column to a text based on file name

Dear all, Does anyone know how I could to add a column of numbers (1s, or 2s, or..., or 6s) to two-column text files (tab-delimited), where the specific number to be added varies as a function of the file naming? Currently, each of my text files has two columns, so the column with the... (12 Replies)
Discussion started by: rlapate
12 Replies
Login or Register to Ask a Question