10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I'm working on a SGE cluster and trying to echo the variables passed to the qsub command.
My script is as follows
#$ -pe make 10
if ; then
echo "Variable is not set"
echo "Variable says: $StatedUserName"
and I run the... (1 Reply)
Discussion started by: nans
2. Shell Programming and Scripting
I'm trying to edit my working bash script to an SGE script in order to submit it as a job to the cluster.
Currently I have:
# Perform fastqc on files in a specified directory.
for ((j=1; j <=17; j++))
... (0 Replies)
Discussion started by: una1992
3. UNIX and Linux Applications
Im looking to reduce the number of cpus available on a certain node in our cluster available for jobs using SGE.
i.e. we have one node that has 24 cpus available for jobs on SGE, i would like to reduce that to 16. Thanks (1 Reply)
Discussion started by: olifu02
I am using AIX 5.
Just swapped over an HP printer.
The old printer was on a JetDirect box. The new printer connects directly to the network. Using the same IP address to print to, so the only alteration I made was to edit the etc/qconfig file to alter the port setting from 9103 to 9100. I can... (2 Replies)
Discussion started by: charding
5. Shell Programming and Scripting
I have the following SGE submission (HPC calculation) script, which is just a Bash script:
#$ -S /bin/bash
#$ -l h_rt=1:00:0
#$ -l mem=4G
#$ -N XXX
#$ -pe qlc 24
#$ -P XXX
#$ -wd /home/uccaxxx/Scratch/222PdT/3vac/c0001/
mpirun -m $TMPDIR/machines -np $NSLOTS... (2 Replies)
Discussion started by: crunchgargoyle
6. High Performance Computing
I am new to cluster benchmarking wondering if there was any guide available that I missed in my google searchs for HPL. (0 Replies)
Discussion started by: futamill
We have a problem with remote printers installed on our server.
Consistently, the printer status is ready but the impressions of the queue are waiting therefore blocked. To unblock the situation, we must launch stopsrc qdaemon-s-s and startsrc qdaemon to reactivate the queue.
Thank you... (2 Replies)
Discussion started by: GBAGO
Hwey I manage a Unix box where I ama having multiple printer problems. the only way to get printers to print again is by rebooting. I stop and start services with no luck. Any one have any ideas? It can go weeks with being OK but then any given printer can go and cause the entire print queue to... (6 Replies)
Discussion started by: uk2us88
I´m having a lot of problems when working with message queues, both on HP-UX Systems and Sun Solaris. When we fill a queue with a messages, the system hangs and locks everything that relies on the use of IPC resources. Anyone knows how to eliminate this problem?
Haroldo Teixeira (2 Replies)
Discussion started by: haroldo
10. UNIX for Dummies Questions & Answers
Does anyone know what is meant by PRINTER STATUS CONNECT concerning print queues?
At work we run a Perle/Connectix JetStream 8500 (RJ45 Model) to connect our dot matrix printers and often we get the Connect Status.
Nobody I speak to knows what the status means. When the printer... (0 Replies)
Discussion started by: nickbungus
CLUSTER(1) General Commands Manual CLUSTER(1)
cluster - find clusters in a graph and augment the graph with this information.
cluster [-v?] [ -Ck ] [ -ck ] [ -o outfile ] [ files ]
cluster takes as input a graph in DOT format, finds node clusters and augments the graph with this information. The clusters are specified
by the "cluster" attribute attached to nodes; cluster values are non-negative integers. cluster attempts to maximize the modularity of the
clustering. If the edge attribute "weight" is defined, this will be used in computing the clustering.
The following options are supported:
-Ck specifies a targeted number of clusters that should be generated. The specified number k is only a suggestion and may not be real-
isable. If k == 0, the default, the number of clusters that approximately optimizes the modularity is returned.
-ck specifies clustering method. If k == 0, the default, the modularity will be used. If k == 1 modularity quality will be used.
Specifies that output should go into the file outfile. By default, stdout is used.
-v Verbose mode.
Applying cluster to the following graph,
1 -- 2 [weight="10."];
2 -- 3 [weight=1];
3 -- 4 [weight="10."];
4 -- 5 [weight=10];
5 -- 6 [weight=10];
3 -- 6 [weight="0.1"];
4 -- 6 [weight="10."];
Yifan Hu <email@example.com>
Blondel, V.D., Guillaume, J.L., Lambiotte, R., Lefebvre, E.: Fast unfolding of communities in large networks. Journal of Statistical
Mechanics: Theory and Experiment (2008), P10008.
3 March 2011 CLUSTER(1)