10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. UNIX for Dummies Questions & Answers
I have a log file from /m/n/o/A.log with 1 line
current content: 19518634,SW,windows_x86_64
and an folder from /x/y/z/testit_folder
How do you write a shell script to rename test_folder to changed_monthdate_19518634
If today is 04/23 the name should be changed_0423_19518634
Thanks for your... (3 Replies)
Discussion started by: sabercats
3 Replies
3. Shell Programming and Scripting
Hello,
I am newbie to bash scripting. Could someone help me with the following.
I have log file with output as shown below
**************************LOG*************************
11/20/2013 9:11:23.64 Pinging xx.xx.xx.xx with 32 bytes of data:
11/20/2013 9:11:23.64 Reply from xx.xx.xx.xx:... (4 Replies)
Discussion started by: meena_2013
4 Replies
4. Shell Programming and Scripting
Hi!
I just want to count number of files in a directory, and write to new text file, with number of files and their name
output should look like this,,
assume that below one is a new file created by script
Number of files in directory = 25
1. a.txt
2. abc.txt
3. asd.dat... (20 Replies)
Discussion started by: Akshay Hegde
20 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have a large number of subdirectories (>200), and in each of these directories there is a file with a name like "opp1234.dat".
I'd like to know how I could change the names of these files to say "out.dat" in all these subdirectories in one go.
Thanks! (5 Replies)
Discussion started by: lost.identity
5 Replies
6. Shell Programming and Scripting
I want to search a bunch of files and list only those containing a minimum number of pattern matches. So if I want to identify files containing 3 (or more) instances of the pattern "said:" and I have file1 that contains the lines:
He said:
She said:
and file2 that contains the lines:
He... (3 Replies)
Discussion started by: stumpyuk
3 Replies
7. UNIX for Dummies Questions & Answers
how can i list all files in my home directory that have a 4 digit id number, the line number where the id is located and the id itself not printing the entire line? (5 Replies)
Discussion started by: hobiwhenuknowme
5 Replies
8. Shell Programming and Scripting
Hi,
I want to list the files containing a no of pattern
like for single string i can use
grep -l "string" *
This command will enlist the files containg this string. Similarly i would like to use for multiple string.
I like to enlist file names having string1 and string 2
Can... (3 Replies)
Discussion started by: vikash_k
3 Replies
9. Shell Programming and Scripting
Hi All,
Can you please help me.
The situation is like this. There are many different file name in this directory.
I have to grep all the file that the name start with "PTWO" and rename it to COM with the current date.
This is the script that I have done and it hit an... (16 Replies)
Discussion started by: badbunny9316
16 Replies
10. Shell Programming and Scripting
Hi
I need to rename about hundred of files which contain ".R " and the end, for example:
/t1/data/f2993trn.ix7.R
The new file should not have ".R" extension, ex:
/t1/data/f2993trn.ix7.R
Is there a command which I can put in the loop to do this? Thansk for any advice -A (6 Replies)
Discussion started by: aoussenko
6 Replies