10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hello all,
I wrote this command line for some calculation on my given input files based on another input file which is a txt file.
while read BAM REGION; do samtools view $BAM $REGION | awk '{if ($2==0) print $0}' | wc -l >>log.txt; echo "$REGION"; done >> log.txt <regions.txt
It takes... (4 Replies)
Discussion started by: @man
4 Replies
2. Shell Programming and Scripting
I trying to write a script in bash that take a list of users in “fileA” and searches another list user in “fileB” if the user does not exist in “file B” write the user to another file “file C”.
Please note “fileA” and “fileB” contains over 1000 users
Basically
“fileA” “fileB”
... (2 Replies)
Discussion started by: hassan1
2 Replies
3. Shell Programming and Scripting
Hi all,
I have a shell script which I use to login to the server from the client and then from the server I run a bunch of other scripts to complete my task. I am having problems with the script below-
#!/bin/bash
while read line
do
connections=`echo $line | cut -d " " -f 1`
period=`echo... (3 Replies)
Discussion started by: joydeep4u
3 Replies
4. Shell Programming and Scripting
Hello:
I have the following code:
----------------------------------
open (OUTPUT_FILE, ">>/usr/users/rovolis/PREPAID/CC/TCG/PP.$cyear$cmonth$cday.txt")||die "$!";
82 open (OUTPUT_FILE2, ">>/usr/users/rovolis/PREPAID/CC/TCG/PR.$cyear$cmonth$cday.txt")||die "$!";
83 # ... (0 Replies)
Discussion started by: chriss_58
0 Replies
5. Shell Programming and Scripting
Hi All
I am reading data from the database and writing to temporary file in the below format.
1=XP|external_component|com.adp.meetingalertemail.processing.MeetingAlertEmail|EMAILALERTPUSH|32|4#XP |classpath|/usr/home/dfusr/lib/xalan.jar:
/usr/home/dfusr/lib/xerces.jar: ... (2 Replies)
Discussion started by: rajeshorpu
2 Replies
6. Shell Programming and Scripting
Self professed idot looking for help
LOL
Hi all, I am new to Unix and I have to write a shell script that will check to see if a file exist and then create it if it does not. The file I need to search for is titled "A1. dat" and here is my feeble attempt at creating the script:
#!/bin/bash... (2 Replies)
Discussion started by: Tinablue
2 Replies
7. UNIX for Dummies Questions & Answers
if test -z "$1"
then echo "you must give a filename or filepath"
else path=`dirname $1`
f_name =`basename $1`
if path="."
then path=`pwd`
fi
fi
cat $f_name $path >> index.txt
The only problem I am encountering with this is writing $path to index.txt
Keeps going gaga:
cat:... (1 Reply)
Discussion started by: Vintage_hegoog
1 Replies
8. Programming
I'm trying to write a function which opens a file pointer and writes one of the function parameters into the file, however for some reason Im getting a core dump error.
The code is as below
void WriteToFile(char *file_name, char *data)
{
FILE *fptr;
/*disk_name_size is a... (10 Replies)
Discussion started by: JamesGoh
10 Replies
9. UNIX for Dummies Questions & Answers
Hi guys
I'm having trouble with trying to create a script which calculates the grade of a student and the marks out of 300.
The grades are:
0-49% fail
50-59% pass
60-69% credit pass
70-79% distinction
80-100% high distinction
less than 0 or greater than 100 displays error message.
My... (1 Reply)
Discussion started by: CompNoob
1 Replies
10. HP-UX
Our system is having a server and multiple clients. We are monitoring the client FDs using select() system call in HP-UX.
After establishing connection-using socket with the remote client, before start sending the data we are checking the status of socket using select( ) call. For first 16... (0 Replies)
Discussion started by: AshokG
0 Replies