moving

ELASTIX(1)							   User Commands							ELASTIX(1)

NAME

       elastix - perform image registration

SYNOPSIS

       elastix mandatory-args [optional-args]

DESCRIPTION

       elastix registers a moving image to a fixed image.  The registration-process is specified in the parameter file.

OPTIONS

       Call elastix from the command line with mandatory arguments:

       -f	 fixed image

       -m	 moving image

       -out	 output directory

       -p	 parameter file, elastix handles 1 or more "-p"

       Optional extra commands:

       -fMask	 mask for fixed image

       -mMask	 mask for moving image

       -t0	 parameter file for initial transform

       -priority set the process priority to high or belownormal (Windows only)

       -threads  set the maximum number of threads of elastix

       The  parameter-file  must contain all the information necessary for elastix to run properly. That includes which metric to use, which opti-
       mizer, which transform, etc.  It must also contain information specific for the metric, optimizer, transform, ...   For	a  usable  parame-
       ter-file, see the website.

SEE ALSO

       transformix(1)

       Check the website http://elastix.isi.uu.nl, or mail elastix.support@gmail.com.

elastix version: 4.400						   December 2010							ELASTIX(1)