eneconv(1) GROMACS suite, VERSION 4.5.4-dev-20110404-bc5695c eneconv(1)
eneconv - converts energy files
eneconv -f ener.edr -o fixed.edr -[no]h -[no]version -nice int -b real -e real -dt real -offset real -[no]settime -[no]sort -[no]rmdh
-scalefac real -[no]error
With multiple files specified for the -f option:
Concatenates several energy files in sorted order. In the case of double time frames, the one in the later file is used. By specifying
-settime you will be asked for the start time of each file. The input files are taken from the command line, such that the command eneconv
-f *.edr -o fixed.edr should do the trick.
With one file specified for -f:
Reads one energy file and writes another, applying the -dt, -offset, -t0 and -settime options and converting to a different format if
necessary (indicated by file extentions).
-settime is applied first, then -dt/ -offset followed by -b and -e to select which frames to write.
-f ener.edr Input, Mult.
-o fixed.edr Output
Print help info and quit
Print version info and quit
-nice int 19
Set the nicelevel
-b real -1
First time to use
-e real -1
Last time to use
-dt real 0
Only write out frame when t MOD dt = offset
-offset real 0
Time offset for -dt option
Change starting time interactively
Sort energy files (not frames)
Remove free energy block data
-scalefac real 1
Multiply energy component by this factor
Stop on errors in the file
- When combining trajectories the sigma and E2 (necessary for statistics) are not updated correctly. Only the actual energy is correct. One
thus has to compute statistics in another way.
More information about GROMACS is available at <http://www.gromacs.org/>.
Mon 4 Apr 2011 eneconv(1)