massXpert mass spectrometry package 1.6.9 (Default branch)


 
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Old 02-16-2008
massXpert mass spectrometry package 1.6.9 (Default branch)

Image The massXpert software package is a mass spectrometry environment for linear (bio-)polymers. It inherits all the innovations of GNU polyxmass. It allows the detailed definition of new polymer chemistries in the XpertDef module. These chemistry definitions are then used in the desktop calculator-like mass calculator (XpertCalc) and in the sophisticated polymer sequence editor and (bio-)chemical/mass spectrometric simulations module (XpertEdit). Available simulations include polymer and monomer chemical modifications, polymer sequence cleavage, gas-phase fragmentation, m/z ratio calculations, and more. License: GNU General Public License (GPL) Changes:
This release improves the flexibility of the monomer modification procedure: now it is possible to define a modification in the monomer modification dialog without the modification having to be defined in the polymer chemistry definition. This makes it much faster to test structural hypotheses. The polymer modifications are now easily visualized in the polymer sequence editor, and there they can be easily modified. The documentation has been updated.Image

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ARCHPATH(1)						      General Commands Manual						       ARCHPATH(1)

NAME
archpath - output arch (tla/Bazaar) archive names, with support for branches SYNOPSIS
archpath archpath branch archpath branch--version DESCRIPTION
archpath is intended to be run in an arch (tla or Bazaar) working copy. In its simplest usage, archpath with no parameters outputs the package name (archive/category--branch--version) associated with the working copy. If a parameter is given, it may either be a branch--version, in which case archpath will output a corresponding package name in the current archive and category, or a plain branch name (without '--"), in which case archpath will output a corresponding package name in the current archive and category and with the same version as the current working copy. This is useful for branching. For example, if you're using Bazaar and you want to create a branch for a new feature, you might use a com- mand like this: baz branch $(archpath) $(archpath new-feature) Or if you want to tag your current code onto a 'releases' branch as version 1.0, you might use a command like this: baz branch $(archpath) $(archpath releases--1.0) That's much easier than using 'baz tree-version' to look up the package name and manually modifying the result. AUTHOR
archpath was written by Colin Watson <cjwatson@debian.org>. Like archpath, this manual page is released under the GNU General Public License, version 2 or later. DEBIAN
Debian Utilities ARCHPATH(1)