10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
The bash below executes and does find all the .bam files in each R_2019 folder. However set -x shows that the .bam extension only gets removed from one .bam file in each folder (appears to be the last in each). Why is it not removing the extension from each (this is $SAMPLE)? Thank you :).
set... (4 Replies)
Discussion started by: cmccabe
4 Replies
2. Shell Programming and Scripting
Hello experts,
I have a text file with lot of curly brackets (both opening { & closing } ). I need to delete them alongwith the text between opening & closing brackets' pair.
For ex: Input:-
59. Rh1 Qe4 {(Qf5-e4 Qd8-g8+ Kg6-f5
Qg8-h7+ Kf5-e5 Qh7-e7+ Ke5-f5 Qe7-d7+ Qe4-e6 Qd7-h7+ Qe6-g6... (6 Replies)
Discussion started by: prvnrk
6 Replies
3. Shell Programming and Scripting
In the bash below I am asking the user for a panel and reading that into bed. Then asking the user for a file and reading that into file1.Is the grep in bold the correct way to apply the selected panel to the file? I am getting a syntax error. Thank you :)
... (4 Replies)
Discussion started by: cmccabe
4 Replies
4. Shell Programming and Scripting
I am trying to use awk skip each line with a ## or # and check each line after for STB= and if that value in greater than or = to 0.8, then at the end of line the text "STRAND BIAS" is written in else "GOOD".
So in the file of 4 entries attached.
awk tried:
awk NR > "##"' "#" -F"STB="... (6 Replies)
Discussion started by: cmccabe
6 Replies
5. Shell Programming and Scripting
I need to remove ] followed by newline character to convert lines like:
line1]
line2
into:
line1line2 (4 Replies)
Discussion started by: locoroco
4 Replies
6. Shell Programming and Scripting
Hi.
I would like to have experts help on below action.
I have text files in which page nubmers exists in form like
PAGE : 1
PAGE : 2
PAGE : 3 and so on there is other text too. I would like to know is it possible to check the last occurance of Page... (6 Replies)
Discussion started by: lodhi1978
6 Replies
7. Shell Programming and Scripting
I am attempting to insert multiple lines of text into a specific place in a text file based on the lines above or below it.
For example, Here is a portion of a zone file.
IN NS ns1.domain.tld.
IN NS ns2.domain.tld.
IN ... (2 Replies)
Discussion started by: cdn_humbucker
2 Replies
8. Shell Programming and Scripting
Evening all. I'm having a terrible time with a script I've been working on for a few days now...
Say I have a text file named top10song.tm2, with the following in it:
kernkraft 400
Imagine
i kissed a girl
Thriller
animals
hallelujah
paint it black
psychosocial
Oi to the world... (14 Replies)
Discussion started by: DJ Charlie
14 Replies
9. Shell Programming and Scripting
here is my prob ..
i have a very large text files and i need to locate specific lines, copy them and then replace a single word in the replaced text
example
find all lines that contain '/etc', copy the line immediately below (not at the end of the file) and then replace '/etc' with '/root'... (1 Reply)
Discussion started by: jmvbxx
1 Replies
10. Shell Programming and Scripting
Hello,
I create a file touch 1201093003 fichcomp
and inside a repertory (which hava a lot of files) I want to list all files created before this file :
find *.* \! -maxdepth 1 - newer fichcomp but this command returned bash: /usr/bin/find: Argument list too long
but i make a filter all... (1 Reply)
Discussion started by: yacsil
1 Replies