10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi,
Sure it's an easy one, but it drives me insane.
input ("|" separated):
1|A,B,C,A
2|A,D,D
3|A,B,B
I would like to count the occurence of each capital letters in $2 across the entire file, knowing that duplicates in each record count as 1.
I am trying to get this output... (5 Replies)
Discussion started by: beca123456
5 Replies
2. Shell Programming and Scripting
The below awk executes as is and produces the current output. It isvery close but what Ican not seem to do is add the -exon..., the ... portion comes from $1 and the _exon is static and will never change. If there is + sign in $4 then the ... is in acending order or sequential. If there is a - in... (2 Replies)
Discussion started by: cmccabe
2 Replies
3. Shell Programming and Scripting
I am trying to remove all the lines and spaces where the count in $4 or $5 is greater than 1 (more than 1 letter). The file and the output are tab-delimited. Thank you :).
file
X 5811530 . G C NLGN4X
17 10544696 . GA G MYH3
9 96439004 . C ... (1 Reply)
Discussion started by: cmccabe
1 Replies
4. Shell Programming and Scripting
Hi Folks,
I have a file with fields as follows which has last field in multiple lines. I would like to combine a line which has three fields with single field line for as shown in expected output. Please help.
INPUT
hname01 windows appnamec1eda_p1, ... (5 Replies)
Discussion started by: shunya
5 Replies
5. Shell Programming and Scripting
I am trying to confirm the counts from another code and tried the below awk, but the syntax is incorrect. Basically, outputting the counts of each condition in $8. Thank you :)
awk '$8==/TYPE=snp/ /TYPE=ins/ /TYPE=del/ {count++} END{print count}'... (6 Replies)
Discussion started by: cmccabe
6 Replies
6. UNIX for Dummies Questions & Answers
Hi,
let's say an input looks like:
A|C|C|D
A|C|I|E
A|B|I|C
A|T|I|B
as the title of the thread explains, I am trying to get something like:
1|A=4
2|C=2|B=1|T=1
3|I=3|C=1
4|D=1|E=1|C=1|B=1
i.e. a count of every character in each field (first column of output) independently, sorted... (4 Replies)
Discussion started by: beca123456
4 Replies
7. Shell Programming and Scripting
Hi Gurus,
I'm scratching my head over and over and couldn't find the the right way to compose this AWK properly - PLEASE HELP :confused:
Input:
c,d,e,CLICK
a,b,c,CLICK
a,b,c,CONV
c,d,e,CLICK
a,b,c,CLICK
a,b,c,CLICK
a,b,c,CONV
b,c,d,CLICK
c,d,e,CLICK
c,d,e,CLICK
b,c,d,CONV... (6 Replies)
Discussion started by: Royi
6 Replies
8. Shell Programming and Scripting
When parsing multiple fields in a file using AWK, how do you group by one of the fields and parse by delimiters?
to clarify
If a file had
tom | 223-2222-4444 , randofield
ivan | 123-2422-4444 , random filed
... | and , are the delimiters ...
How would you group by the social security... (4 Replies)
Discussion started by: Josef_Stalin
4 Replies
9. Shell Programming and Scripting
Hello,
I have a text file with n lines in the following format (9 column fields):
Example:
contig00012 149606 G C 49 68 60 18 c$cccccacccccccccc^c
I need to count the number of lower-case and upper-case occurences in column 9, respectively, of the... (3 Replies)
Discussion started by: s052866
3 Replies
10. UNIX for Dummies Questions & Answers
Hi, I have several files with same filename pattern. I want to calculate count of individual files using grep/egrep. Let me be more descriptive
In directory E1 i have files like
ab_20091201_12:24 ab_20091201_03:24 cd_20091201_04:16 cd_20091203_08:34 ef_20091201_06:12 ef_20091201
Now i want... (3 Replies)
Discussion started by: shounakboss
3 Replies