awk Matching Columns - Am I missing something?

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awk merge matching columns

I know I'm not the first one asking this but my code still does not work: File 1: gi|1283| tRNAscan exon 87020 88058 . - . transcript_id "Parent=tRNA-Tyr5.r01"; gi|3283| tRNAscan exon 97020 97058 . + . transcript_id "Parent=tRNA-Tyr6.r01"; gi|4283| rRNAscan exon 197020 197058 . - . transcript_id...

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Hello all, I have a large csv file where there are four types of rows I need to merge into one row per person, where there is a column for each possible code / type of row, even if that code/row isn't there for that person. In the csv, a person may be listed from one to four times...

3. Shell Programming and Scripting

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4. Shell Programming and Scripting

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input: chr1 1 2 3 chr1 1 2 4 chr1 2 4 5 chr2 3 6 9 chr2 3 6 10 Code: awk '{a+=$4}END{for (i in a) print i,a}' input Output: chr112 7 chr236 19 chr124 5 Desired output: chr1 1 2 7 chr2 3 6 19 chr1 2 4 5

5. Shell Programming and Scripting

awk to copy previous line matching a particular columns

Hello Help, 2356798 7689867 999 000 123678 20385907 9797 666 17978975 87468976 968978 98798 I am trying to have out put which actually look for the third column value of 9797 and then it insert line there after with first, second column value exactly as the previous line and replace the third...

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Hello, I have two files as following: #bin chrom chromStart chromEnd name score strand observed 585 chr2 29442 29443 rs4637157 0 + C/T 585 chr2 33011 33012 rs13423995 0 + A/G 585 chr2 34502 34503 rs13386087 0 + ...

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8. Shell Programming and Scripting

awk - Matching columns between 2 files and reordering results

I am trying to match 4 colums (first_name,last_name,dob,ssn) between 2 files and when there is an exact match I need to write out these matches to a new file with a combination of fields from file1 and file2. I've managed to come up with a way to match these 2 files based on the columns (see below)...

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using command line arguments as columns for pattern matching using awk

Hi, I wish to use a column, as inputted by a user from command line, for pattern matching. awk file: { if($1 ~ /^8/) { print $0> "temp2.csv" } } something like this, but i want '$1' to be any column as selected by the user from command line. ...

10. Shell Programming and Scripting

awk/sed search lines in file1 matching columns in file2

Hi All, as you can see I'm pretty new to this board. :D I'm struggling around with small script to search a few fields in another file. Basically I have file1 looking like this: 15:38:28 sz:10001 pr:14.16 15:38:28 sz:10002 pr:18.41 15:38:29 sz:10003 pr:19.28 15:38:30 sz:10004...

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shtool-table

SHTOOL-TABLE.TMP(1)					      GNU Portable Shell Tool					       SHTOOL-TABLE.TMP(1)

NAME

       shtool-table - GNU shtool pretty-print a field-separated list

SYNOPSIS

       shtool table [-F|--field-sep sep] [-w|--width width] [-c|--columns cols] [-s|--strip strip] strsepstr...

DESCRIPTION

       This pretty-prints a list of strings as a table.

OPTIONS

       The following command line options are available.

       -F, --field-sep sep
	   Separate columns using sep. Default is ":".

       -w, --width width
	   Width of each column. Default is 15 characters.

       -c, --columns cols
	   Number of columns. Default is 3.

       -s, --strip strip
	   Strip off any characters past strip. Default is 79.

EXAMPLE

	#   shell script
	shtool table -F , -w 5 -c 4 "1,2,3,4,5,6,7,8,9,10,11,12"

HISTORY

       The GNU shtool table command was originally written by Ralf S.  Engelschall <rse@engelschall.com> in 1999 for GNU shtool.

SEE ALSO

       shtool(1), tr(1), fmt(1), sh(1), awk(1), sed(1).

18-Jul-2008							   shtool 2.0.8 					       SHTOOL-TABLE.TMP(1)

Shell Programming and Scripting