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1. Shell Programming and Scripting
Unable to get the desired output. Need only the rows which has repeated values in column 5.
Input File <tab separated file>
chr1 3773797 3773797 CEP10 1
chr1 3773797 3773797 CEP104 2
chr1 3689350 3689350 SMIM1 2
chr1 3773797 3773797 CEP4 3
chr1 3773797 3773797 EP104 ... (7 Replies)
Discussion started by: himanshu
7 Replies
2. Shell Programming and Scripting
Hi,
I have the following input in a file & need output as mentioned below(need counter of every occurance of field which is to be increased by 1).
Input:
919143110065
919143110065
919143110052
918648846132
919143110012
918648873782
919143110152
919143110152
919143110152... (2 Replies)
Discussion started by: siramitsharma
2 Replies
3. Shell Programming and Scripting
Hi,
I want to count the occurrences of strings in a column and display as in example below:
Input:
get1 345 789 098
get2 567 982 090
fet4 777 610 632
get1 800 544 230
get1 600 788 451
get2 892 321 243
get1 673 111 235
fet3 789 220 278
fet4 768 222 341
output:
4 get1 345 789... (7 Replies)
Discussion started by: aydj
7 Replies
4. Shell Programming and Scripting
Hi,
My input files is like this
axis1 0 1 10
axis2 0 1 5
axis1 1 2 -4
axis2 2 3 -3
axis1 3 4 5
axis2 3 4 -1
axis1 4 5 -6
axis2 4 5 1
Now, these are my following tasks
1. Print a first column for every two rows that has the same value followed by a string.
2. Match on the... (3 Replies)
Discussion started by: jacobs.smith
3 Replies
5. Shell Programming and Scripting
Hi all I have a need of searching some pattern in file by month and then count unique records
D11
G11
R11 -------> Pattern available in file
S11
Jan$1 to $5 column contains some records in which I want to find unique
for this purpose I have written script like below
awk '/Jan/ ||... (4 Replies)
Discussion started by: nex_asp
4 Replies
6. UNIX for Dummies Questions & Answers
Hi !
input:
A|B|C|D
A|F|C|E
A|B|I|C
A|T|I|B
As the title of the thread says, I would need to get:
1|3|2|4
I tried different variants of this command, but I don't manage to obtain what I need:
gawk 'BEGIN{FS=OFS="|"}{for(i=1; i<=NF; i++) a++} END {for (b in a) print b}' input
... (2 Replies)
Discussion started by: beca123456
2 Replies
7. UNIX for Dummies Questions & Answers
Hey everyone!
I have a tab delimited data set which I want to create an output contained the calculation of number of those lines with a certain value in 2nd and 3rd column.
my input file is like this:
ID1 1 10M AAATTTCCGG
ID2 5 4M ACGT
ID3 5 8M ACCTTGGA
ID4 5 ... (7 Replies)
Discussion started by: @man
7 Replies
8. Shell Programming and Scripting
Hi All,
I am another biologist attempting to parse a large txt file containing several million lines like:
tucosnp 56762 T Y 228 228 60 23 .CcCcc,,..c.c,cc,,.C...
What I need to do is get the frequency of periods (.) plus commas (,) in column 9, and populate this number into another... (1 Reply)
Discussion started by: peromhc
1 Replies
9. UNIX for Dummies Questions & Answers
Hi All,
I have the following input which i want to process using AWK.
Rows,NC,amount
1,1202,0.192387
2,1201,0.111111
3,1201,0.123456
i want the following output
count of rows = 3 ,sum of amount = 0.426954
Many thanks (2 Replies)
Discussion started by: pistachio
2 Replies
10. Shell Programming and Scripting
Dear experts,
Need your great help !
The input file is as follows:
Name: test01
Name UID: C7:9D:79:52:2A:3F:DF:11:A8:64:00:60:16:36:04:02
Shareable: YES
HBA/SP Pairs:
HBA UID SP Name SPPort
------- ... (9 Replies)
Discussion started by: tojzz
9 Replies