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Not writing output

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# 1  
Old 04-21-2015
Not writing output
In the attached bash in the convert function the out_position.txt in not being writing to the annovar directory and I can not figure out why. Thank you Smilie.
bashparse.sh (12.5 KB) 
# 2  
Old 04-21-2015
This line seems to be meant to generate it, so make sure its being called:

Code:
C:/Python27/python.exe C:/Python27/run_batch_job.py C:/Python27/out.txt C:\annovar\out_position.txt PositionConverter

This User Gave Thanks to Corona688 For This Post:
cmccabe
# 3  
Old 04-21-2015
Thank you Smilie.
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