How to loop script for multiple file?


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting How to loop script for multiple file?
# 1  
Old 04-21-2014
How to loop script for multiple file?

hi, i am running a java script on few thousand files (e1.rnk....en.rnk) but manually,. is there any way to run it automatically by changing the output directory (-out) ?

thanx in advance
ex:

Code:
java -jar commands -res /path/e1.rnk -out /path/e1 -gui false
java -jar commands -res /path/e2.rnk -out /path/e2 -gui false
java -jar commands -res /path/en.rnk -out /path/en -gui false

# 2  
Old 04-21-2014
Try:
Code:
for i in /path/*.rnk; do java -jar commands -res $i -out ${i%.*} -gui false; done

These 3 Users Gave Thanks to bartus11 For This Post:
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Loop through multiple files in bash script

Hi Everybody, I'm a newbie to shell scripting, and I'd appreciate some help. I have a bunch of .txt files that have some unwanted content. I want to remove lines 1-3 and 1028-1098. #!/bin/bash for '*.txt' in <path to folder> do sed '1,3 d' "$f"; sed '1028,1098 d' "$f"; done I... (2 Replies)
Discussion started by: BabyNuke
2 Replies

2. Shell Programming and Scripting

Loop multiple directory, find a file and send email

Hello ALL, need a BASH script who find file and send email with attachment. I have 50 folders without sub directories in each generated files of different sizes but with a similar name Rp01.txt Rp02.txt Rp03.txt ...etc. Each directors bound by mail group, I need a script that goes as... (1 Reply)
Discussion started by: penchev
1 Replies

3. Shell Programming and Scripting

Execution of loop :Splitting a single file into multiple .dat file

hdr=$(cut -c1 $path$file|head -1)#extract header”H” trl=$(cut -c|path$file|tail -1)#extract trailer “T” SplitFile=$(cut -c 50-250 $path 1$newfile |sed'$/ *$//' head -1')# to trim white space and extract table name If; then # start loop if it is a header While read I #read file Do... (4 Replies)
Discussion started by: SwagatikaP1
4 Replies

4. UNIX for Dummies Questions & Answers

How to remove first few characters from multiple file names without do loop?

Hi Fellows, I was wondering how I can remove first few characters from multiple file names without do loop in unix? e.g. water123.xyz water456.xyz to 123.xyz 456.xyz Thanks Paul Thanks. (3 Replies)
Discussion started by: Paul Moghadam
3 Replies

5. Shell Programming and Scripting

Reset while loop to loop same file multiple times

Hi, I want to read file multiple times. Right now i am using while loop but that is not working. ex. While read line do while read line2 do echo stmt1 #processing some data based on data., done < file2.txt done < file1.txt # This will have 10... (4 Replies)
Discussion started by: tmalik79
4 Replies

6. Shell Programming and Scripting

While loop reading file with multiple conditions

Hi Am trying to print the PIDs of process in a file and trying to grep any PID from that file I set the if condition as $value != "PID" and $value != "-" Assign that number to a variable Am confused since am using while loop to read the line from file and again if condition to check those... (2 Replies)
Discussion started by: Priya Amaresh
2 Replies

7. UNIX for Dummies Questions & Answers

Using Shell Script To Loop Program Through Multiple Text Files

Hello, So I have approximately 300 files of raw data (.txt) files that I am using to perform statistical analysis. I have been able to construct a Fortran program that is able to perform my statistical analysis on a file by file basis. However, I now want to be able to loop program through... (19 Replies)
Discussion started by: Jimmyd24
19 Replies

8. UNIX for Dummies Questions & Answers

Writing a loop to process multiple input files by a shell script

I have multiple input files that I want to manipulate using a shell script. The files are called 250.1 through 250.1000 but I only want the script to manipulate 250.300 through 250.1000. Before I was using the following script to manipulate the text files: for i in 250.*; do || awk... (4 Replies)
Discussion started by: evelibertine
4 Replies

9. UNIX for Dummies Questions & Answers

Writing a loop to manipulate a script and store it in multiple output files

I have a script where the the 9th line looks like this: $filename=sprintf("250.1chr%d.ped", $N); I want to modify this script 1000 times, changing 250.1chr%d.ped to 250.2chr%d.ped, 250.3chr%.ped.......and so on all the way to 250.1000chr%d.ped and store each output in files called ... (4 Replies)
Discussion started by: evelibertine
4 Replies

10. UNIX for Dummies Questions & Answers

Foreach loop to run a perl script on multiple files

Hi, I have thousands of files in a directory that have the following 2 formats: 289620178.aln 289620179.aln 289620180.aln 289620183.aln 289620184.aln 289620185.aln 289620186.aln 289620187.aln 289620188.aln 289620189.aln 289620190.aln 289620192.aln.... and: alnCDS_1.fasta (1 Reply)
Discussion started by: greptastic
1 Replies
Login or Register to Ask a Question