10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have this fastq file:
@M04961:22:000000000-B5VGJ:1:1101:9280:7106 1:N:0:86
GGGGGGGGGGGGCATGAAAACATACAAACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCA
+test-1
GGGGGGGGGGGGGGGGGCCGGGGGFF,EDFFGEDFG,@DGGCGGEGGG7DCGGGF68CGFFFGGGG@CGDGFFDFEFEFF:30CGAFFDFEFF8CAF;;8... (10 Replies)
Discussion started by: Xterra
10 Replies
2. Shell Programming and Scripting
Hi,
I hope you can help me out please?
I need to replace from character 8-16 with AAAAAAAA and the rest should stay the same after character 16
gtwrhtrd11111111rjytwyejtyjejetjyetgeaEHT
wrehrhw22222222hytekutkyukrylryilruilrGEQTH
hrwjyety33333333gtrhwrjrgkreglqeriugn;RUGNEURGU
... (4 Replies)
Discussion started by: stinkefisch
4 Replies
3. Shell Programming and Scripting
Hi,
I would like to find a 3-letter character series in a string/variable and replace it with x's.
An example set of strings is:
563MS333_101_afp_400-100_screening
563MS333_104-525_rjk_525_screening
563MS333_110_dlj_500-100_w24
563MS333_888-100_mmm_424_screening
The only constants... (5 Replies)
Discussion started by: goodbenito
5 Replies
4. Shell Programming and Scripting
I have a file example.txt as follows :SomeTextGoesHere
$$TODAY_DT=20140818
$$TODAY_DT=20140818
$$TODAY_DT=20140818I need to automatically update the date (20140818) in the above file, by getting the new date as argument, using a shell script.
(It would even be better if I could pass... (5 Replies)
Discussion started by: SriRamKrish
5 Replies
5. Shell Programming and Scripting
Hello all,
I have a directory with 2000+ files. I need to look in each file for an invoice number. To identify this, i can search for the string 'BIG' and then retrieve the next 30 characters. I was thinking awk for this, but not sure how to do it. Each file contains one long string and in... (8 Replies)
Discussion started by: jdinero
8 Replies
6. Shell Programming and Scripting
here is what i want to achieve... consider a file contains below contents. the file size is large about 60mb
cat dump.sql
INSERT INTO `table1` (`id`, `action`, `date`, `descrip`, `lastModified`) VALUES (1,'Change','2011-05-05 00:00:00','Account Updated','2012-02-10... (10 Replies)
Discussion started by: vivek d r
10 Replies
7. Shell Programming and Scripting
helloo
I wonder if there's a way to cut characters out of a string and keep only
the last 2 by using sed.
For example if there's the todays' date:
2012-05-06
and we only want to keep the last 2 characters which are the day.
Is there a quick way to do it with sed? (2 Replies)
Discussion started by: vlm
2 Replies
8. Shell Programming and Scripting
Hi Please help me to refine my syntax. I want to delete the excess characters from the out put below.
-bash-3.00$ top -b -n2 -d 00.20 |grep Cpu|tail -1 | awk -F ":" '{ print $2 }' | cut -d, -f1
4.4% us
now i want to delete the % and us. How wil i do that to make it just 4.4.
Thanks (7 Replies)
Discussion started by: redtred
7 Replies
9. Shell Programming and Scripting
Hi,
I'm fairly new to UNIX, but hopefully some-one can help me with this:
I am using the following code to find files with the name "example.xml":
find . -name "example.xml" -print
that would print me a list like the example here:
./dir1/dir2/example.xml... (5 Replies)
Discussion started by: boijie
5 Replies
10. UNIX for Dummies Questions & Answers
Can I get some help on this please, I have looked at the many post with similar questions and have tried the solutions and they are not working for my scenario which is:
I have a text file (myfile) that contains
b_log=$g_log/FILENAME.log
echo "Begin processing file FILENAME " >> $b_log
... (4 Replies)
Discussion started by: CAGIRL
4 Replies