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1. Shell Programming and Scripting
In the below perl code I am using tags within each line to extract certain information. The tags that are used are:
STB >0.8 is STRAND BIAS otherwise GOOD
FDP is the second number
GO towards the end of the line is read into an array and the value returned is outputed, in the first line that... (1 Reply)
Discussion started by: cmccabe
1 Replies
2. UNIX for Dummies Questions & Answers
Sorry to bother you guys again. I have a file1 with multiple columns like this:gga_miR_100 gga_miR_300 gga_miR_3500 gga_miR_4600 gga_miR_5600 gga_miR_30 gga_miR_500
kj rwg ghhh jy jyu we vf
5g 5hg h6 56h i8 45t 44r4
4bg 4r546 9lgtr (fer) 4fr f433
3feev f4 bf4 35g
vfr ge
2rr
... (5 Replies)
Discussion started by: yuejian
5 Replies
3. Shell Programming and Scripting
Hi,
I want to extract first column from a file and redirect the output to another file in perl.
I am able to do this from command line by executing below commands.
perl -anle 'print $F' Input.dat > Output.dat
perl -ne '@F = split("\t", $_); print "$F\n";' Input.dat > Output.dat
perl -anE... (7 Replies)
Discussion started by: Neethu
7 Replies
4. Shell Programming and Scripting
Hi,
I am trying with the below Perl one-liner using regular expression to extract the first and second column of a text file:
perl -p -e "s/\s*(\w+).*/$1/"
perl -p -e "s/\s*.+\s(.+)\s*/$1\n/"
whereas the text file's data looks like:
Error: terminated 2233
Warning: reboot 3434
Warning:... (3 Replies)
Discussion started by: royalibrahim
3 Replies
5. UNIX for Dummies Questions & Answers
No Chr Pos Qual GT_1 GT_2
1. chr1 478493 595 A/G G/G
2. chr1 879243 700 A/T T/T
3. chr2 889922 1300 C/C C/C
4. chr2 1926372 300 T/A T/A
5. chr3 237474 500 G/C C/C
6. chr3 575757 700 ... (2 Replies)
Discussion started by: mscott
2 Replies
6. Shell Programming and Scripting
Hi,
I was doing some research and can't seem to find anything. I'm trying to automate a process by creating a script to read a csv line and column and assigning that value to a variable for the script to process it.
Also if you could tell me the line and column if it's on another work ... (3 Replies)
Discussion started by: vpundit
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7. UNIX for Dummies Questions & Answers
Hi everyone,
i am new to perl programming, i have a problem in extracting single column from csv file. the column is the 20th column,
please help me..
at present i use this code
#!C:/perl/bin
use warnings;
use strict;
my $file1 = $ARGV;
open FILE1, "<$file1"
or die "Can't... (13 Replies)
Discussion started by: kvth
13 Replies
8. Shell Programming and Scripting
Can Anyone tell me how to extract the second column of a xls sheet
And compare the content of each row of the column with a .h file.
xls sheet is having only one spreadsheet. (2 Replies)
Discussion started by: suvenduperl
2 Replies
9. Shell Programming and Scripting
Hi everybody
I have some problems with PERL programming.
I have a file with two columns, both with numeric values.
I have to extract the values > 50 from the 2nd columns and sum them among them.
The I have to sum the respective values in the first column on the same line and, at the end, I... (6 Replies)
Discussion started by: m_elena
6 Replies
10. Shell Programming and Scripting
Hi,
Shell script: I would need help on How to extract 3rd line 4th column of a file with single liner
Thanks in advance. (4 Replies)
Discussion started by: krishnamurthig
4 Replies
Locale::Maketext::Extract::Plugin::Mason(3) User Contributed Perl Documentation Locale::Maketext::Extract::Plugin::Mason(3)
NAME
Locale::Maketext::Extract::Plugin::Mason - HTML::Mason (aka Mason 1) and Mason (aka Mason 2) format parser
SYNOPSIS
$plugin = Locale::Maketext::Extract::Plugin::Mason->new(
$lexicon # A Locale::Maketext::Extract object
@file_types # Optionally specify a list of recognised file types
)
$plugin->extract($filename,$filecontents);
DESCRIPTION
Extracts strings to localise from Mason files.
SHORT PLUGIN NAME
mason
VALID FORMATS
HTML::Mason (aka Mason 1)
Strings inside <&|/l>...</&> and <&|/loc>...</&> are extracted.
Mason (aka Mason 2) Strings inside <% $.floc { %>...</%> or <% $.fl { %>...</%> or <% $self->floc { %>...</%> or <% $self->fl { %>...</%>
are extracted.
KNOWN FILE TYPES
All file types
SEE ALSO
xgettext.pl
for extracting translatable strings from common template systems and perl source files.
Locale::Maketext::Lexicon
Locale::Maketext::Extract::Plugin::Base
Locale::Maketext::Extract::Plugin::FormFu
Locale::Maketext::Extract::Plugin::Perl
Locale::Maketext::Extract::Plugin::TT2
Locale::Maketext::Extract::Plugin::YAML
Locale::Maketext::Extract::Plugin::TextTemplate
Locale::Maketext::Extract::Plugin::Generic
AUTHORS
Audrey Tang <cpan@audreyt.org>
COPYRIGHT
Copyright 2002-2008 by Audrey Tang <cpan@audreyt.org>.
This software is released under the MIT license cited below.
The "MIT" License
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the
"Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish,
distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to
the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
perl v5.16.2 2011-07-20 Locale::Maketext::Extract::Plugin::Mason(3)
