join based on line number when one file is missing lines


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting join based on line number when one file is missing lines
# 1  
Old 06-27-2011
join based on line number when one file is missing lines

I have a file that contains 87 lines, each with a set of coordinates (x & y). This file looks like:
Code:
1 200.3 -0.3
2 201.7 -0.32
...
87 200.2 -0.314

I have another file which contains data that was taken at certain of these 87 positions. i.e.:

Code:
37 125
42 175
86 142

where the first number is the line number of the coordinates in the other file. Is there a way to get an output like:

Code:
37 201.2 -0.324 125
42 200.1 -0.311 175
86 203.0 -0.35 142

where I am pulling columns 2 & 3 from the first file with 87 lines, and column 4 from the second file (in this example with 3 lines but I want to be able to do more)?

I've tried using join to do this but it doesn't bring up anything!

Thanks!
Moderator's Comments:
Mod Comment
Please use code tags when posting data and code samples!

Last edited by vgersh99; 06-27-2011 at 09:09 PM.. Reason: code tags, please!
# 2  
Old 06-27-2011
Code:
nawk 'FNR==NR{data[$1]=$2;next} $1 in data {print $0, data[$1]}' dataFile coordinatesFile

Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. UNIX for Beginners Questions & Answers

Reading a file line by line and print required lines based on pattern

Hi All, i want to write a shell script read below file line by line and want to exclude the lines which contains empty value for MOUNTPOINT field. i am using centos 7 Operating system. want to read below file. # cat /tmp/d5 NAME="/dev/sda" TYPE="disk" SIZE="60G" OWNER="root"... (4 Replies)
Discussion started by: balu1234
4 Replies

2. Shell Programming and Scripting

awk join lines based on keyword

Hello , I will need your help once again. I have the following file: cat file02.txt PATTERN XXX.YYY.ZZZ. 500 ROW01 aaa. 300 XS 14 ROW 45 29 AS XD.FD. PATTERN 500 ZZYN002 ROW gdf gsste ALT 267 fhhfe.ddgdg. PATTERN ERE.MAY. 280 PATTERRNTH 5000 rt.rt. ROW SO a 678 PATTERN... (2 Replies)
Discussion started by: alex2005
2 Replies

3. Shell Programming and Scripting

To check the missing file based on sequence number.

Hi All, I have a requirement that i need to list only the missing sequences with a unix script. For Example: Input: FILE_001.txt FILE_002.txt FILE_005.txt FILE_006.txt FILE_008.txt FILE_009.txt FILE_010.txt FILE_014.txt Output: FILE_003.txt FILE_004.txt FILE_007.txt FILE_011.txt... (5 Replies)
Discussion started by: Arun1992
5 Replies

4. Shell Programming and Scripting

Print lines based on line number and specified condition

Hi, I have a file like below. 1,2,3,4,5,6,7,8,9I would like to print or copied to a file based of line count in perl If I gave a condition 1 to 3 then it should iterate over above file and print 1 to 3 and then again 1 to 3 etc. output should be 1,2,3 4,5,6 7,8,9 (10 Replies)
Discussion started by: Anjan1
10 Replies

5. UNIX for Dummies Questions & Answers

Split file based on number of blank lines

Hello All , I have a file which needs to split based on the blank lines Name ABC Address London Age 32 (4 blank new line) Name DEF Address London Age 30 (4 blank new line) Name DEF Address London (8 Replies)
Discussion started by: Pratik4891
8 Replies

6. Shell Programming and Scripting

Join lines from two files based on match

I have two files. File1 >gi|11320906|gb|AF197889.1|_Buchnera_aphidicola ATGAAATTTAAGATAAAAAATAGTATTTT >gi|11320898|gb|AF197885.1|_Buchnera_aphidicola ATGAAATTTAATATAAACAATAAAA >gi|11320894|gb|AF197883.1|_Buchnera_aphidicola ATGAAATTTAATATAAACAATAAAATTTTT File2 AF197885 Uroleucon aeneum... (2 Replies)
Discussion started by: pathunkathunk
2 Replies

7. Shell Programming and Scripting

Merge two non-consecutive lines based on line number or string

This is a variation of an earlier post found here: unixcom/shell-programming-scripting/159821-merge-two-non-consecutive-lines.html User Bartus11 was kind enough to solve that example. Previously, I needed help combining two lines that are non-consecutive in a file. Now I need to do the... (7 Replies)
Discussion started by: munkee
7 Replies

8. Shell Programming and Scripting

Delete lines based on line number

I have a file with ~200K lines, I need to delete 4K lines in it. There is no range. I do have the line numbers of the lines which I want to be deleted. I did tried using > cat del.lines sed '510d;12d;219d;......;3999d' file > source del.lines Word too long. I even tried... (2 Replies)
Discussion started by: novice_man
2 Replies

9. Shell Programming and Scripting

Join in a single line variable number of lines

Hi all, I have a file with little blocks beginning with a number 761XXXXXX, and 0, 1, 2 or 3 lines below of it beginning with STUS as follow: 761625820 STUS ACTIVE 16778294 STUS NOT ACTIVE 761157389 STUS ACTIVE 16778294 761554921 STUS ACTIVE 16778294 STUS NOT ACTIVE STUS ACTIVE OP... (4 Replies)
Discussion started by: cgkmal
4 Replies

10. Shell Programming and Scripting

How can I get an if statement to execute based on number of lines in a file?

I need to have an if statement in a script to run if there are certain processes running. Easiest way I can see to do this is to run a ps and grep the results based on what I am looking for: $ ps -ef | grep wtrs --- webtrend 5046 1 0 May 12 ? 0:28 /webtrends/versions/6.1/wtrs_ui... (6 Replies)
Discussion started by: LordJezo
6 Replies
Login or Register to Ask a Question