Random word generation with AWK


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting Random word generation with AWK
# 1  
Old 07-09-2010
Random word generation with AWK

Hi - I have a word GTTCAGAGTTCTACAGTCCGACGAT

I need to extract all the possible "chunks" of 7 or above letter "words" from this.

SO, my out put should be

GTTCAGA
TTCAGAG
TCAGAGT
CAGAGTTCT
TCCGACGAT
CAGTCCGACG


etc.

How can I do that with awk or any other language? I have no clue where to start.

Thanks a lot in advance.
# 2  
Old 07-09-2010
Code:
echo "GTTCAGAGTTCTACAGTCCGACGAT" | perl -nle 'for ($j=7;$j<=length($_);$j++){for ($i=0;$i<=length($_)-$j;$i++){print substr($_,$i,$j)}}'

# 3  
Old 07-09-2010
@bartus

thanks a lot for the quick reply. It works like charm. SmilieSmilie
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. UNIX for Beginners Questions & Answers

How to search for a word in column header that fully matches the word not partially in awk?

I have a multicolumn text file with header in the first row like this The headers are stored in an array called . which contains I want to search for each elements of this array from that multicolumn text file. And I am using this awk approach for ii in ${hdr} do gawk -vcol="$ii" -F... (1 Reply)
Discussion started by: Atta
1 Replies

2. Shell Programming and Scripting

Using awk and grep for sql generation

Hi, I have a file pk.txt which has table related data in following format TableName | PK Employee | id Contact|name,phone,country I have another file desc.txt which lists datatype of each field like this: Table|Field|Type Employee|id|int Contact|name|string Contact|country|string... (7 Replies)
Discussion started by: wahi80
7 Replies

3. Shell Programming and Scripting

awk concatenation issue - SQL generation

Greetings Experts, I have an excel file and I am unable to read it directly into awk (contains , " etc); So, I cleansed and copied the data into notepad. I need to generate a script that generates the SQL. Requirement: 1. Filter and select only the data that has the "mapping" as "direct"... (4 Replies)
Discussion started by: chill3chee
4 Replies

4. AIX

Random password generation

Hello, I have created a script to generate a random password on Linux/Solaris, but I simply cannot use it on my AIX VMs since Bash isn't installed on them. I need a password that is randomly created with the following... (12 Replies)
Discussion started by: gfroute
12 Replies

5. UNIX for Dummies Questions & Answers

How to del word by random input?

Hi, I got big problem. a line contains like this: Hell "A,B,C", how to delete A or B or C by using sed or other tools? I do not have any idea. Many thanks. (2 Replies)
Discussion started by: lemon_06
2 Replies

6. Shell Programming and Scripting

Random word from a flat text file

Hello, I need to take a random word from a flat text file with words in it seperated by spaces. The code I am using, always gives me the first word. Can anyone please shed some light on this. Here's my code. Thanks echo table roof ceiling jar computer monitor keyboard carpet >... (5 Replies)
Discussion started by: Freakhan
5 Replies

7. Shell Programming and Scripting

random number generation in ksh

i tried to use $random function in unix i simply typed print $random at shell and it returnted no value is there any function in korn shell that i can use to generate random number help is appreciated (2 Replies)
Discussion started by: er_zeeshan05
2 Replies

8. Shell Programming and Scripting

Random NUmbers Generation with out repetation

Hi I have the below code MAXCOUNT=10 count=1 echo echo "$MAXCOUNT random numbers:" echo "-----------------" while # Generate 10 ($MAXCOUNT) random integers. do number=$ + 1 ] "echo $number" let "count += 1" # Increment count. done But aftre executing this ... (8 Replies)
Discussion started by: lalitka
8 Replies

9. UNIX for Dummies Questions & Answers

Random number generation in ksh

I need to generate a random number in ksh everytime I run the script ,the range should be from 100 to 24800,I could use $RANDOM but I seem to have no control over the range of numbers ,could you please suggest some way I could implement this .Thanks. Mervin (2 Replies)
Discussion started by: mervin2006
2 Replies

10. Programming

Random number generation

Hi...How can I generate random numbers between a given range ...preferably between 1 and 100...in UNIX C programming...? I tried out functions like rand(),drand48() etc but didnt get satisfactory results... Thanks a lot in advance.......... (1 Reply)
Discussion started by: tej.buch
1 Replies
Login or Register to Ask a Question