10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I want to add the sequence length of File_1.fa and File _2.fa to form the form the fifth column in File_1_pos.txt and File_2_poa.txt respectively using awk and bash. Can anyone help me? Thanks
Get sequence length of each file
File_1.fa
File_2.fa
Add the sequence length to be the third... (6 Replies)
Discussion started by: Ibk
6 Replies
2. Shell Programming and Scripting
Dear Users,
I am writing a for loop in shell (BASH), and am struggling with a very specific detail:
SU_DATA=/home/........./su/
for(blah blah blah)
{
a=1001
b=1002
suop2 $SU_DATA/$a_clean.su $SU_DATA/$b_clean.su op=sum > W1.su
}
Here, it looks like the variables are... (1 Reply)
Discussion started by: martm
1 Replies
3. Shell Programming and Scripting
I have a variable
var=string1:string2:string3
I want to get the string de-concatenated and put it as
var1=string1
var2=string2
var3=string3
Thanks in advance.
---------- Post updated at 02:18 PM ---------- Previous update was at 01:45 PM ----------
I got the solution as below:... (2 Replies)
Discussion started by: Deepak62828r
2 Replies
4. Shell Programming and Scripting
Input
#GEO-1-type-1-fwd-Initial 890 1519
OPKHIJEFVTEFVHIJEFVOPKHIJTOPKEFVHIJTEFVOPKOPKHIJHIJHIJTTOPKHIJHIJEFVEFVOPKHIJOPKHIJOPKEFVEFVOPKHIJHIJEFVHIJHIJEFVTHIJOPKOPKTEFVEFVEFVOPKHIJOPKOPKHIJTTEFVEFVTEFV
#GEO-1-type-2-fwd-Terminal 1572 2030... (7 Replies)
Discussion started by: patrick87
7 Replies
5. Shell Programming and Scripting
Hi,
I want to display the string value with number value. I dont know how to display. Can anyone help me.
This is my code
export A=${file_name}
echo $a $b $sum | awk '{ printf "%011.f,%014.f,%014.f\n", $1,$2,$3}' >> ${MRR_OUTPUT}
the out put shold be
${A}, $a, $b
filename,... (2 Replies)
Discussion started by: easterraj
2 Replies
6. Programming
Hi,
Well as the title says, I have an array of strings (delimited by null). The length of the array is variable and length of each string is variable as well. What I need is one huge string with the original strings in the array separated by spaces.
For example is an array is such that array... (12 Replies)
Discussion started by: newhere
12 Replies
7. Shell Programming and Scripting
hi
My requirement is i have a file with some records like this
file name ::xyz
a=1
b=100,200
,300,400
,500,600
c=700,800
d=900
i want to change my file
a=1
b=100,200,300,400
c=700,800
d=900
if record starts with " , " that line should fallows the previous line.please give... (6 Replies)
Discussion started by: srivsn
6 Replies
8. Shell Programming and Scripting
Hi All,
I have a ',' delimited file and i would like concatenate a new value at a specific column.
Example :-
xXXX,XYZ,20071005,ABC,DEF,123
xXXX,XYZ,20071005,ABC,DEF,123
xXXX,XYZ,20071005,ABC,DEF,123
The output that i want is
xXXX,XYZ,20071005001,ABC,DEF,123... (7 Replies)
Discussion started by: amitkhiare
7 Replies
9. UNIX for Dummies Questions & Answers
how to concatenate a string and variable like
a=rahul
and i want to put it into another variable 'b' as "rahul_prasath"
i dont want to use another variable for "_prasath"
how to do it? (1 Reply)
Discussion started by: rolex.mp
1 Replies
10. Shell Programming and Scripting
I just need to add a static ID to each output record so the users will be able to tell which group records in combined flatfiles come from I have the static ID in a bourne variable. I tried
awk '{print "${GroupID}" $0}' infile > outfile
But I ended up with the string ${GroupID} instead of... (5 Replies)
Discussion started by: gillbates
5 Replies