UNIX and Linux Forums - Search Results

Showing results 1 to 5 of 5 Search took 0.00 seconds. Search: Posts Made By: kmkocot

Forum: Shell Programming and Scripting 07-06-2010

print lines AFTER lines cointaining a regexp (or print every first and fourth line)

3,444

Posted By

print lines AFTER lines cointaining a regexp (or print every first and fourth line)

Hi all,

This should be very easy but I can't figure it out...

I have a file that looks like this:

@SRR057408.1 FW8Y5CK02R652T length=34
AGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT
+SRR057408.1...

Forum: Shell Programming and Scripting 12-15-2009

cat certain files in directories to files named after the dir?

2,473

Posted By

Thank you!

Thank you!

Forum: Shell Programming and Scripting 12-14-2009

cat certain files in directories to files named after the dir?

2,473

Posted By

cat certain files in directories to files named after the dir?

Hi all,

I have a directory with many subdirectories each named like so: KOG0001, KOG0002, ...KOG9999.

Each of these subdirectories contain a variable number two kinds of files (nuc and prot)...

Forum: Shell Programming and Scripting 11-06-2009

Deleting files that don't contain particular text strings / more than one instance of a string

3,095

Posted By

Thanks for your help! That worked really well. ...

Thanks for your help! That worked really well.

The KOG*_final.fasta files look like the example below. There is a one-line header that always begins with a greater-than sign, has a 3-4 letter...

Forum: Shell Programming and Scripting 11-04-2009

Deleting files that don't contain particular text strings / more than one instance of a string

3,095

Posted By

Deleting files that don't contain particular text strings / more than one instance of a string

Hi all,

I have a directory containing many subdirectories each named like KOG#### where # represents any digit 0-9. There are several files in each KOG#### folder but the one I care about is named...

Showing results 1 to 5 of 5