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My apologies. Will pay more attention when I post the next time.
I would still appreciate your feedback on my question though!
Thank you



---------- Post updated at 09:34 AM ----------...

Hello,
I have a question regarding file naming under a loop in tcsh. I have the following code:
#!/bin/tcsh
foreach file (test/ProteinDirectory/*) # The * is a bunch of ProteinFile1,...

Thank you both for the speedy replies!
I tried both of your suggestions and they both work fine with me.

I am just slightly confused about Jean-Pierre's comment for the solution of jim mcnamara,...

Hello,
I have a file Pairs.txt composed of 3 columns. For simplicity, this is the file:

A B C
B D W
X Y Z
Z W K
B A C
Y J Q
F M P
Y X Z

I am trying to reduce the file such that I only...

Thank you all for your replies!
Works fine now! :)

To anyone who reads this and has the same problem,
I've figured it out...

The easiest way is to have the PerlScript.pl output to a file. If you just use the standard print command in perl without...

Hello,
I have a file Test.txt with 9 columns that looks like this:

1g12 A 14 19 2OAY A 326 331 AAAASA
1l7v A 68 73 1l7v A 68 73 AALAIS
1l7v A 68 73 1XVW B 72 77 AALAIS
1l7v A 68 73 1XXU A 65...

Thank you both for your replies. Unfortunately I have tried both of them,

1. with the awk script I only ended up getting the headers as the output:
PDB CHAIN StartPos EndPos PDB CHAIN StartPos...

Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:

File A:...

Hello,
I have a perl script that takes in one file of input and outputs to a file. I would like to run this script on several input files, and I would like to run it with qsub, something like this:...

Hello,
Apologies if this question has been repeated before, but I am getting myself confused even more as I scan the posts!

I have two files, file1 is a column:
1dlwa_
1s69a_
1idra_
1ngka_
...

Hello,
I apologize if this was addressed in a previous post. I have done some searching but may have missed it. I am trying to read a list from a file, for example:


3bik
3bix
3biu
3bin...