10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. UNIX for Dummies Questions & Answers
Hi All,
I want to fetch the files based on .done file and display the .csv files and Wil take .csv files for processing.
1.I need to display the .done files from the directory.
2.next i need to search for the .Csv files based on .done file.then move .csv files for the one directory
... (2 Replies)
Discussion started by: girija.g6
2 Replies
3. Shell Programming and Scripting
Hi
I Have a directory and i have some files below
abc.txt
abc.gif
gtee.txt
ghod.pid
umni.log
unmi.tar
How can use glob function to grep abc files , i have created a variable "text" and i assigned value as "abc", please suggest me how can we use glob.glob( ) to get the output as below... (2 Replies)
Discussion started by: kumar85shiv
2 Replies
4. Shell Programming and Scripting
Hi all,
I have a many folders with zipped files in them. The zipped files are txt files from different folders. The txt files have the same names. If i try to
find . -type f -name "*.zip" -exec cp -R {} /myhome/ZIP \; it fails since the ZIP files from different folders have the same names and... (2 Replies)
Discussion started by: pmkenya
2 Replies
5. Shell Programming and Scripting
Hi,
I have files with filenames as below.
SGM Daily Sales Email-en-us-05312012.xlwa
I want to rename it in .xls. I am writing a script to change this, as there can be multiple files in subfolders.
I have the following script.
#!/bin/ksh
for oldfile in $(find... (1 Reply)
Discussion started by: mac4rfree
1 Replies
6. UNIX for Dummies Questions & Answers
I'm currently only able to perform some very basic functions, so hope this makes sense...
I have a set of about 27 files that need to be renamed from something like this:
000012ABCDEFGHIJ.XXX.YYY.ZZZ
000078KLMNO.XXX.YYY.ZZZ
000099PQ.XXX.YYY.ZZZ
to something like this:
newa012.abc... (11 Replies)
Discussion started by: bbmcg
11 Replies
7. Shell Programming and Scripting
hi!
i want to rename all files with no extension with the extension DAT.
with this command ls |grep -v "\\." i can list files but i dont know how i am going to rename them..
so
i tried
FILE_LIST=ls |grep -v "\\."
for TEST_FILE in ${FILE_LIST}
do
mv $TEST_FILE... (2 Replies)
Discussion started by: kouppoua
2 Replies
8. UNIX for Dummies Questions & Answers
Hi,
I know that to list files with no extension, we can use..
ls -1 | grep -v "\."
And to list .prog files, we can use..
ls -1 *.prog
or
ls -1 | grep '.prog$' (4 Replies)
Discussion started by: adshocker
4 Replies
9. Shell Programming and Scripting
Hi,
I'm not very experienced in shell scripting and that's probably why I came across the following problem:
I do have several hundred pairs of text files (PF00x.spl and PF00x.shd) where the first file (PF00x.spl) needs to be renamed according a string that is included in the second file... (12 Replies)
Discussion started by: inCH
12 Replies
10. HP-UX
I am brand new to hp unix systems. I see some files without extension on this system. If I type name of the file it shows me so many detail but does not take me back to command prompt. What are these files and how do I come back to command prompt? Please help (1 Reply)
Discussion started by: rajahindustani
1 Replies