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If the total bytes of the filenames is below the ARG_MAX limit:

awk -F\| '/^\[/ {
_1 = $1
sub(/[^ ]+ */, x, _1)
}
{
print _1, NR, $0
}' OFS=_ /root/Desktop/test/*.* |
sort...

Can you confirm that the date/time stamp is in the format "YYYYMMDD" then Hour, minute, second, hundredth and that the lines are all headed by the date/time stamp and not split to a second line?
...

-F\| - records are split at |
_1 = $1 - save $1 into a variable because we need to modify it
sub(/[^ ]+ */, x, _1) - strip the leading part of the string currently in _1 (the part before and...

awk -F\| '/^\[/ {
_1 = $1
sub(/[^ ]+ */, x, _1)
}
{
print _1, NR, $0
}' OFS=_ infile |
sort -t_ -k1,1 -k2,2n |
cut -d_ -f3-

How about:-
cat /root/Desktop/test/* | awk -F\| '/^\[/ {
_1 = $1
sub(/[^ ]+ */, x, _1)
}
{
print _1, NR, $0
}' OFS=_ | sort -t_ -k1,1 -k2,2n | cut -d_ -f3- >> Single2
No input file should...

Yes,
sorry, I forgot the sort ... | cut ... part :)

OK,
but this is rather different :) ... and easier.

In your first post you gave the following example as an expected output:
[20100623 07:55:52.61|DEBUG |#000062|test123 "GET...

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