debian man page for swiss::gn

Query: swiss::gn

OS: debian

Section: 3pm

Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar

SWISS::GN(3pm)						User Contributed Perl Documentation					    SWISS::GN(3pm)

Name
       SWISS::GN.pm

Description
       SWISS::GN represents one gene name from the GN line.  The container object for several synonym gene names is SWISS::GeneGroup.

Inherits from
       SWISS::BaseClass.pm

Attributes
       "text"
	   One gene name.

Methods
   Standard methods
       new
       fromText
       toText

   Reading/Writing methods
       toMixedCase(@regexps)
	   Convert gene names to mixed case, according to one or more regular expressions.  This is typically useful for converting uppercase ORF
	   numbers to mixed case.  E.g. the E.coli gene "B1563" converted with the regexp '(b(d{4}(.d)?))' will yield the gene name "b1563".
	   The method also supports fused gene names, e.g.  "B0690/B0691" is converted to "b0690/b0691". The method changes the text of the
	   SWISS::GN object and also returns the new text value.

perl v5.10.1							    2006-01-26							    SWISS::GN(3pm)
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