debian man page for bio::seqio::game::gamehandler

Bio::SeqIO::game::gameHandler(3pm)			User Contributed Perl Documentation			Bio::SeqIO::game::gameHandler(3pm)

NAME
       Bio::SeqIO::game::gameHandler -- PerlSAX handler for game-XML

SYNOPSIS
       This modules is not used directly

DESCRIPTION
       Bio::SeqIO::game::gameHandler is the top-level XML handler invoked by PerlSAX

FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one
       of the Bioperl mailing lists.

       Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
       web:

	 https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Sheldon McKay
       Email mckays@cshl.edu

APPENDIX
       The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

   start_document
	Title	: start_document
	Function: begin parsing the document

   end_document
	Title	: end_document
	Function: finish parsing the document

   load
	Title	: load
	Usage	: $seqs = $handler->load
	Function: start parsing
	Returns : a ref to a list of sequence objects
	Args	: an optional flag to supress <computation_analysis> elements (not used yet)

   s_game
	Title	: s_game
	Function: begin parsing game element

   e_game
	Title	: e_game
	Function: process the game element

   e_seq
	Title	: e_seq
	Function: process the sequence element

   e_map_position
	Title	: e_map_position
	Function: process the map_position element

   e_annotation
	Title	: e_annotation
	Function: process the annotation

perl v5.14.2							    2012-03-02					Bio::SeqIO::game::gameHandler(3pm)