Query: bio::graphics::rendereri
OS: debian
Section: 3pm
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
Bio::Graphics::RendererI(3pm) User Contributed Perl Documentation Bio::Graphics::RendererI(3pm)NAMEBio::Graphics::RendererI - A renderer for the Bio::Graphics class that renders Bio::SeqFeature::CollectionI objects onto Bio::Graphics::Panels using configuration information provided by a Bio::Graphics::ConfiguratorI.SYNOPSIS# Get a renderer somehow, called $renderer # create a new panel and render contents a feature collection onto it my $config = new ConfigIO( $config_file )->getConfig(); my $features = $data_provider->getCollection(); my ( $tracks_rendered, $panel ) = $renderer->render( $features, $prefs );DESCRIPTIONRenderer of Bio::SeqFeature::CollectionIs (collections of features) onto a Bio::Graphics::Panel using a Bio::Graphics::ConfiguratorI for general and track-specific rendering options.FEEDBACKMailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: http://bugzilla.open-bio.org/AUTHORPaul Edlefsen <paul@systemsbiology.org>. Copyright (c) 2003 Institute for Systems Biology This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.APPENDIXThe rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ render Title : render Usage : ( $rendered, $panel ) = $renderer->render( $collection, $configurator [, $panel ] ); Function: Renders the SeqFeatures in the given collection onto a Bio::Graphics::Panel (if no panel is given, one will be created), using the given Bio::Graphics::ConfiguratorI for general and track-specific rendering options. Returns : In a scalar context returns the number of tracks rendered. In a list context, returns a two-element list containing the number of features rendered and the panel. Args : A Bio::SeqFeature::CollectionI and a Bio::Graphics::ConfiguratorI and optionally a Bio::Graphics::Panel. Status : Public perl v5.14.2 2012-02-20 Bio::Graphics::RendererI(3pm)
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