Query: bio::annotation::typemanager
OS: debian
Section: 3pm
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
Bio::Annotation::TypeManager(3pm) User Contributed Perl Documentation Bio::Annotation::TypeManager(3pm)NAMEBio::Annotation::TypeManager - Manages types for annotation collectionsSYNOPSIS# default type manager $tm = Bio::Annotation::TypeManager->new(); # $key is a string or a Bio::Ontology::TermI compliant object print "The type for $key is ",$tm->type_for_key($key)," "; if( !$tm->is_valid($key,$object) ) { $self->throw("Invalid object for key $key"); }DESCRIPTIONManages types for annotation collections.FEEDBACKMailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated. bioperl-l@bioperl.org Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web: https://redmine.open-bio.org/projects/bioperl/ AUTHOR - Ewan Birney Email birney@ebi.ac.ukAPPENDIXThe rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : Function: Example : Returns : Args : type_for_key Title : type_for_key Usage : Function: Example : Returns : Args : is_valid Title : is_valid Usage : Function: Example : Returns : Args : _add_type_map Title : _add_type_map Usage : Function: Example : Returns : Args : perl v5.14.2 2012-03-02 Bio::Annotation::TypeManager(3pm)
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