bp_seqretsplit(1p) debian man page | unix.com

Man Page: bp_seqretsplit

Operating Environment: debian

Section: 1p

BP_SEQRETSPLIT(1p)					User Contributed Perl Documentation					BP_SEQRETSPLIT(1p)

NAME
seqretsplit - split a sequence (or stream) into a single file per sequence
SYNOPSIS
seqretsplit file1 file2 .. # or seqretsplit < file1
DESCRIPTION
The script will split all sequences from fasta file(s) (or stdin) to individual files. The filename is the sequence ID (everything before the 1st whitespace in a FASTA header). Currently it doesn't check to see that it isn't overwriting an existing file so IDs should be unique This is inspired by EMBOSS seqretsplit tool.
FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via email or the web: https://redmine.open-bio.org/projects/bioperl/
AUTHOR
Jason Stajich <jason_AT_bioperl_DOT_org> perl v5.14.2 2012-03-02 BP_SEQRETSPLIT(1p)
Related Man Pages
bp_parse_hmmsearch(1p) - debian
bio::coordinate::resulti(3pm) - debian
bio::seqfeature::gene::poly_a_site(3pm) - debian
bio::seqio::tigrxml(3pm) - debian
bio::structure::structurei(3pm) - debian
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