BP_SEQ_LENGTH(1p) User Contributed Perl Documentation BP_SEQ_LENGTH(1p)
NAME
seq_length.pl - lists the number of bases and number of sequences in specified sequence database files
SYNOPSIS
seq_length.pl *.fa
DESCRIPTION
seq_length.pl will report the total number of residues and total number of individual sequences contained within a specified sequence
database file.
OPTIONS
-f/--format - Specify the database format ('fasta' is default).
This script uses SeqIO and as such formats are
limited to those which SeqIO system supports.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Jason Stajich
Jason Stajich <jason@bioperl.org>
perl v5.14.2 2012-03-02 BP_SEQ_LENGTH(1p)
