Query: bp_query_entrez_taxa
OS: debian
Section: 1p
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
BP_QUERY_ENTREZ_TAXA(1p) User Contributed Perl Documentation BP_QUERY_ENTREZ_TAXA(1p)NAMEquery_entrez_taxa - query Entrez taxonomy database and print out informationUSAGEquery_entrez_taxa "Homo sapiens" "Saccharomyces cerevisiae" Rhizopus Metazoa query_entrez_taxa -gi 28800981 -gi 54301680 -db nucleotide query_entrez_taxa -gi 71836523 -db protein Provide the genus and species name in quotes, you can also query for a non-species node like Family or Order Command-line options: -v or --verbose : print verbose debugging info -gi : one or many GI numbers to lookup taxon id for -db : the sequence db (nucleotide or protein) the GI is for other arguments are assumed to be species names to lookup in taxonomy dbAUTHORJason Stajich jason-at-bioperl-dot-org perl v5.14.2 2012-03-02 BP_QUERY_ENTREZ_TAXA(1p)
Related Man Pages |
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bp_aacomp(1p) - debian |
fastacmd(1) - debian |
bio::taxonomy::tree(3pm) - debian |
bio::tools::analysis::protein::elm(3pm) - debian |
go::metadata::panther(3pm) - debian |
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