debian man page for bp_nrdb

BP_NRDB(1p)						User Contributed Perl Documentation					       BP_NRDB(1p)

NAME
       bp_nrdb.PLS - a script to emulate Warren Gish's nrdb, make a unique sequence database from a set of input databases

SYNOPSIS
       Usage:
	 bp_nrdb.PLS [options] file1 file2 file3

       Alternative usage
	 bp_nrdb.PLS -p [options] file1 id1 file2 id2 file3 id3

DESCRIPTION
       This script will create a unique database of sequences (quasi-nonredundant).  The options are:

	  -o filename	       - the filename the db is written (STDOUT by default)
	  -a filename	       - the filename to append the db to
	  -l#		       - minimum required sequence length
	  -i		       - do not check for duplicates
	  -n#		       - max number of descriptions to report per seq
	  -d#		       - delimiter to use between consecutive descriptions
	  -p		       - use database id prefixes from command line

AUTHOR
       Jason Stajich, jason-at-bioperl-dot-org

perl v5.14.2							    2012-03-02							       BP_NRDB(1p)