Query: bp_download_query_genbank
OS: debian
Section: 1p
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
BP_DOWNLOAD_QUERY_GENBANK(1p) User Contributed Perl Documentation BP_DOWNLOAD_QUERY_GENBANK(1p)NAMEdownload_query_genbank - script to query Genbank and retrieve recordsUSAGEdownload_query_genbank --query "Neurospora[ORGN]" --db nucest -o Ncrassa_ESTs.fa --format fasta download_query_genbank --queryfile 'filewithquery' --db nucest -o Ncrassa_ESTs.fa --format fasta Other options Provide ONE of: --query query string OR --queryfile profile file with query OR --gi --gifile file with list of GIs to download Database type: --db database (nucest, protein, nucleotide) -f --format sequence file output format -v --verbose debugging output Query options --maxids maximum number of IDs to retrieve in a set --reldate --maxdate maxdate for a record --mindate minimum date for record --datetype edat or mdat (entered or modified) AUTHOR Jason Stajich Jason Stajich, jason-AT-bioperl.org perl v5.14.2 2012-03-02 BP_DOWNLOAD_QUERY_GENBANK(1p)
Related Man Pages |
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bp_search2gff(1p) - debian |
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