debian man page for insdseqget

Query: insdseqget

OS: debian

Section: 1

Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar

INSDSEQGET(1)						     NCBI Tools User's Manual						     INSDSEQGET(1)

NAME
insdseqget - format sequences from GenBank as an XML INSDSet
SYNOPSIS
insdseqget [-] [-d filename] [-i filename] [-m n/p/b] [-n] [-o filename] [-v]
DESCRIPTION
insdseqget retrieves biological sequence data from GenBank (according to an input list of GI accession numbers) and prints it out as an XML INSDSet document.
OPTIONS
A summary of options is included below. - Print usage message -d filename Input file name for date list (desired accessions, one per line, followed by a blank line and a list of allowed dates, also one per line) -i filename Input file name for GI list (default = stdin) -m n/p/b Molecule type: n Nucleotide (default) p Protein b Both -n Return only new records (for which the given GI refers to an old version) -o filename Output file name for the XML INSDSet (default = stdout) -v Fetch SNP Variations
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO
asn2gb(1), gbseqget(1).
NCBI
2006-04-14 INSDSEQGET(1)
Related Man Pages
asn2all(1) - debian
asn2asn(1) - debian
asn2gb(1) - debian
gbseqget(1) - debian
vecscreen(1) - debian
Similar Topics in the Unix Linux Community
filename to contain date
Truncate File contain
Can't pass filename to dtpad editor
Extracting DNA sequences from GenBank files using Perl
Text Manipulation