debian man page for g_rama

g_rama(1)					 GROMACS suite, VERSION 4.5.4-dev-20110404-bc5695c					 g_rama(1)

NAME
       g_rama - computes Ramachandran plots

       VERSION 4.5.4-dev-20110404-bc5695c

SYNOPSIS
       g_rama -f traj.xtc -s topol.tpr -o rama.xvg -[no]h -[no]version -nice int -b time -e time -dt time -[no]w -xvg enum

DESCRIPTION
	 g_rama  selects  the  phi/psi	dihedral combinations from your topology file and computes these as a function of time.  Using simple Unix
       tools such as  grep you can select out specific residues.

FILES
       -f traj.xtc Input
	Trajectory: xtc trr trj gro g96 pdb cpt

       -s topol.tpr Input
	Run input file: tpr tpb tpa

       -o rama.xvg Output
	xvgr/xmgr file

OTHER OPTIONS
       -[no]hno
	Print help info and quit

       -[no]versionno
	Print version info and quit

       -nice int 19
	Set the nicelevel

       -b time 0
	First frame (ps) to read from trajectory

       -e time 0
	Last frame (ps) to read from trajectory

       -dt time 0
	Only use frame when t MOD dt = first time (ps)

       -[no]wno
	View output  .xvg,  .xpm,  .eps and  .pdb files

       -xvg enum xmgrace
	xvg plot formatting:  xmgrace,	xmgr or  none

SEE ALSO
       gromacs(7)

       More information about GROMACS is available at <http://www.gromacs.org/>.

								  Mon 4 Apr 2011							 g_rama(1)