fastx_renamer(1) debian man page | unix.com

FASTX_RENAMER(1)						   User Commands						  FASTX_RENAMER(1)

NAME
       fastx_renamer - FASTA/Q Renamer

DESCRIPTION
       usage: fastx_renamer [-n TYPE] [-h] [-z] [-v] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)

       [-n TYPE]
	      = rename type:

	      SEQ - use the nucleotides sequence as the name.  COUNT - use simply counter as the name.

       [-h]   = This helpful help screen.

       [-z]   = Compress output with GZIP.

       [-i INFILE]
	      = FASTA/Q input file. default is STDIN.

	      [-o OUTFILE] = FASTA/Q output file. default is STDOUT.

SEE ALSO
       The quality of this automatically generated manpage might be insufficient.  It is suggested to visit

	      http://hannonlab.cshl.edu/fastx_toolkit/commandline.html

       to get a better layout as well as an overview about connected FASTX tools.

fastx_renamer 0.0.13.2						     May 2012							  FASTX_RENAMER(1)